myRT

myRT report for GCA_000155735.2_ASM15573v2

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Seq: CP003742.1 Octadecabacter arcticus 238, complete genome (5200279 bp)
Overview 1 RT 1: 4618911-4628938 bp Neighborhood of RT #1 [4618911, 4629033] DDE_Tnp_IS66 Tra8 RVT-UG4 DUF4198 DUF4198 Exop_C Exop_C Exop_C Exop_C fn3 Invasin_D3 IS285 Feature: gene Location: 4618911-4619987 bp Ori: AGI74244.1 Feature: domain Description: DDE_Tnp_IS66 Location: 4619046-4619883 bp Feature: domain Description: DDE_Tnp_IS66 Location: 461 9046-461 9883 bp Feature: gene Location: 4620470-4621492 bp Ori: AGI74245.1 Feature: domain Description: Tra8 Location: 4620479-4621460 bp Feature: domain Description: Tra8 Location: 4620479-4621 460 bp Feature: gene Location: 4621630-4622688 bp Ori: AGI74246.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 4622014-4622467 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 462201 4-4622467 bp Feature: gene Location: 4623110-4627708 bp Ori: AGI74247.1 Feature: domain Description: DUF4198 Location: 4623152-4623368 bp Feature: domain Description: DUF41 98 Location: 46231 52-4623368 bp Feature: domain Description: DUF4198 Location: 4624418-4624508 bp Feature: domain Description: DUF41 98 Location: 462441 8-4624508 bp Feature: domain Description: Exop_C Location: 4624751-4624898 bp Feature: domain Description: Exop_C Location: 4624751 -4624898 bp Feature: domain Description: Exop_C Location: 4625423-4625576 bp Feature: domain Description: Exop_C Location: 4625423-4625576 bp Feature: domain Description: Exop_C Location: 4625762-4625915 bp Feature: domain Description: Exop_C Location: 4625762-462591 5 bp Feature: domain Description: Exop_C Location: 4626440-4626587 bp Feature: domain Description: Exop_C Location: 4626440-4626587 bp Feature: domain Description: fn3 Location: 4626743-4627007 bp Feature: domain Description: fn3 Location: 4626743-4627007 bp Feature: domain Description: Invasin_D3 Location: 4627097-4627370 bp Feature: domain Description: Invasin_D3 Location: 4627097-4627370 bp Feature: gene Location: 4627786-4629033 bp Ori: AGI74248.1 Feature: domain Description: IS285 Location: 4627837-4628938 bp Feature: domain Description: IS285 Location: 4627837-4628938 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), Tra8 (COG2826), RVT-UG4, DUF4198 (pfam10670), Exop_C (pfam18559), fn3 (pfam00041), Invasin_D3 (pfam09134), IS285 (COG3328)