myRT

myRT report for GCA_000169195.2_ASM16919v2

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Seq: CP003056.1 Bacillus coagulans 36D1, complete genome (3552226 bp)
Overview 1 RT 1: 589218-597641 bp 2 RT 2: 1150557-1158502 bp 3 RT 3: 3195297-3206689 bp Neighborhood of RT #1 [589218, 597718] Mod PRK13699 COG3421 RVT-GII GIIM TrmA acpP Neighborhood of RT #2 [1150557, 1158570] UPF0236 HMG-CoA-S_prok RVT-GII GIIM HMG-CoA_reductase_classII UPF0236 Neighborhood of RT #3 [3195297, 3206697] PRK05764 asnC RVT-GII GIIM DnaD nth RVT-GII GIIM MrcB recU Feature: gene Location: 589218-590888 bp Ori: AEO99790.1 Feature: domain Description: Mod Location: 589353-590142 bp Feature: domain Description: Mod Location: 589353-5901 42 bp Feature: domain Description: PRK13699 Location: 590334-590550 bp Feature: domain Description: PRK1 3699 Location: 590334-590550 bp Feature: gene Location: 590891-593482 bp Ori: AEO99791.1 Feature: domain Description: COG3421 Location: 591074-593465 bp Feature: domain Description: COG3421 Location: 591 074-593465 bp Feature: gene Location: 593835-595133 bp Ori: AEO99792.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 594135-594774 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5941 35-594774 bp Feature: domain Description: GIIM Note: maturase Location: 594852-595074 bp Feature: domain Description: GIIM Note: maturase Location: 594852-595074 bp Feature: gene Location: 595612-597018 bp Ori: AEO99793.1 Feature: domain Description: TrmA Location: 595639-596977 bp Feature: domain Description: TrmA Location: 595639-596977 bp Feature: gene Location: 597392-597718 bp Ori: AEO99794.1 Feature: domain Description: acpP Location: 597416-597641 bp Feature: domain Description: acpP Location: 59741 6-597641 bp Feature: gene Location: 1150557-1151972 bp Ori: AEP00278.1 Feature: domain Description: UPF0236 Location: 1150569-1151904 bp Feature: domain Description: UPF0236 Location: 1 1 50569-1 1 51 904 bp Feature: gene Location: 1152116-1153300 bp Ori: AEP00279.1 Feature: domain Description: HMG-CoA-S_prok Location: 1152125-1153271 bp Feature: domain Description: HMG-CoA-S_prok Location: 1 1 521 25-1 1 53271 bp Feature: gene Location: 1153368-1154777 bp Ori: AEP00280.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1153716-1154331 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 5371 6-1 1 54331 bp Feature: domain Description: GIIM Note: maturase Location: 1154385-1154601 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 54385-1 1 54601 bp Feature: gene Location: 1155488-1156777 bp Ori: AEP00281.1 Feature: domain Description: HMG-CoA_reductase_classII Location: 1155509-1156772 bp Feature: domain Description: HMG-CoA_reductase_classII Location: 1 1 55509-1 1 56772 bp Feature: gene Location: 1157155-1158570 bp Ori: AEP00282.1 Feature: domain Description: UPF0236 Location: 1157167-1158502 bp Feature: domain Description: UPF0236 Location: 1 1 571 67-1 1 58502 bp Feature: gene Location: 3195297-3196484 bp Ori: AEP02165.1 Feature: domain Description: PRK05764 Location: 3195300-3196470 bp Feature: domain Description: PRK05764 Location: 31 95300-31 96470 bp Feature: gene Location: 3196541-3197872 bp Ori: AEP02166.1 Feature: domain Description: asnC Location: 3196592-3197867 bp Feature: domain Description: asnC Location: 31 96592-31 97867 bp Feature: gene Location: 3197958-3199367 bp Ori: AEP02167.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3198306-3198921 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 98306-31 98921 bp Feature: domain Description: GIIM Note: maturase Location: 3198975-3199194 bp Feature: domain Description: GIIM Note: maturase Location: 31 98975-31 991 94 bp Feature: gene Location: 3199877-3200572 bp Ori: AEP02168.1 Feature: domain Description: DnaD Location: 3199886-3200570 bp Feature: domain Description: DnaD Location: 31 99886-3200570 bp Feature: gene Location: 3200620-3201279 bp Ori: AEP02169.1 Feature: domain Description: nth Location: 3200635-3201208 bp Feature: domain Description: nth Location: 3200635-3201 208 bp Feature: gene Location: 3201726-3203135 bp Ori: AEP02170.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3202074-3202689 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3202074-3202689 bp Feature: domain Description: GIIM Note: maturase Location: 3202743-3202962 bp Feature: domain Description: GIIM Note: maturase Location: 3202743-3202962 bp Feature: gene Location: 3203264-3205999 bp Ori: AEP02171.1 Feature: domain Description: MrcB Location: 3203312-3205724 bp Feature: domain Description: MrcB Location: 320331 2-3205724 bp Feature: gene Location: 3206092-3206697 bp Ori: AEP02172.1 Feature: domain Description: recU Location: 3206101-3206689 bp Feature: domain Description: recU Location: 32061 01 -3206689 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Mod (COG2189), PRK13699 (putative methylase; Provisional), COG3421 (Uncharacterized protein ), RVT-GII, GIIM (pfam08388), TrmA (COG2265), acpP (PRK00982), UPF0236 (pfam06782), HMG-CoA-S_prok (TIGR01835), HMG-CoA_reductase_classII (cd00644)
PRK05764 (aspartate aminotransferase; Provisional), asnC (PRK03932), DnaD (COG3935), nth (TIGR01083), MrcB (COG0744), recU (TIGR00648)