myRT

myRT report for GCA_000169215.2_ASM16921v2

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Seq: CP002457.1 Shewanella putrefaciens 200, complete genome (4840251 bp)
Overview 1 RT 1: 834812-841823 bp 2 RT 2: 4763551-4768898 bp Neighborhood of RT #1 [834812, 841825] COG3682 PRK09272 RVT_N RVT-GII GIIM RVT-GII GIIM DUF2846 integrase_gron Neighborhood of RT #2 [4763551, 4768930] AcrB Sm_multidrug_ex RVT-GII TnpB_IS66 Feature: gene Location: 834812-835189 bp Ori: ADV53225.1 Feature: domain Description: COG3682 Location: 834815-835175 bp Feature: domain Description: COG3682 Location: 83481 5-8351 75 bp Feature: gene Location: 835279-835638 bp Ori: ADV53226.1 Feature: domain Description: PRK09272 Location: 835288-835606 bp Feature: domain Description: PRK09272 Location: 835288-835606 bp Feature: gene Location: 835896-837368 bp Ori: ADV53227.1 Feature: domain Description: RVT_N Location: 835944-836187 bp Feature: domain Description: RVT_N Location: 835944-8361 87 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 836232-836859 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 836232-836859 bp Feature: domain Description: GIIM Note: maturase Location: 836916-837144 bp Feature: domain Description: GIIM Note: maturase Location: 83691 6-8371 44 bp Feature: gene Location: 838623-839972 bp Ori: ADV53228.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 838905-839523 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 838905-839523 bp Feature: domain Description: GIIM Note: maturase Location: 839571-839775 bp Feature: domain Description: GIIM Note: maturase Location: 839571 -839775 bp Feature: gene Location: 840084-840530 bp Ori: ADV53229.1 Feature: domain Description: DUF2846 Location: 840192-840432 bp Feature: domain Description: DUF2846 Location: 8401 92-840432 bp Feature: gene Location: 840866-841825 bp Ori: ADV53230.1 Feature: domain Description: integrase_gron Location: 840887-841823 bp Feature: domain Description: integrase_gron Location: 840887-841 823 bp Feature: gene Location: 4763551-4766592 bp Ori: ADV56608.1 Feature: domain Description: AcrB Location: 4763560-4766569 bp Feature: domain Description: AcrB Location: 4763560-4766569 bp Feature: gene Location: 4766593-4767069 bp Ori: ADV56609.1 Feature: domain Description: Sm_multidrug_ex Location: 4766653-4766998 bp Feature: domain Description: Sm_multidrug_ex Location: 4766653-4766998 bp Feature: gene Location: 4767122-4767799 bp Ori: ADV56610.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4767452-4767659 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4767452-4767659 bp Feature: gene Location: 4768299-4768580 bp Feature: gene Location: 4768580-4768930 bp Ori: ADV56612.1 Feature: domain Description: TnpB_IS66 Location: 4768607-4768898 bp Feature: domain Description: TnpB_IS66 Location: 4768607-4768898 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3682 (Predicted transcriptional regulator ), PRK09272 (hypothetical protein; Provisional), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DUF2846 (pfam11008), integrase_gron (TIGR02249), AcrB (COG0841), Sm_multidrug_ex (pfam06695), TnpB_IS66 (pfam05717)