myRT

myRT report for GCA_000174795.2_ASM17479v2

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Seq: CP002442.1 Geobacillus sp. Y412MC52, complete genome (3628883 bp)
Overview 1 RT 1: 366370-371665 bp 2 RT 2: 586846-591289 bp 3 RT 3: 1233457-1238689 bp 4 RT 4: 3214656-3222480 bp Neighborhood of RT #1 [366370, 371676] DmpA RVT-GII GIIM MFS_MdtG_MDR_like PspA Neighborhood of RT #2 [586846, 591289] TlyC RVT-GII GIIM SASP Neighborhood of RT #3 [1233457, 1238730] PRK00549 recA RVT-GII HNHc recA Neighborhood of RT #4 [3214656, 3222506] RVT-GII GIIM VanZ HTH_Tnp_ISL3 DDE_Tnp_ISL3 Feature: gene Location: 366370-367413 bp Ori: ADU92827.1 Feature: domain Description: DmpA Location: 366406-367375 bp Feature: domain Description: DmpA Location: 366406-367375 bp Feature: gene Location: 367496-368758 bp Ori: ADU92828.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 367697-368315 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 367697-36831 5 bp Feature: domain Description: GIIM Note: maturase Location: 368363-368579 bp Feature: domain Description: GIIM Note: maturase Location: 368363-368579 bp Feature: gene Location: 369390-370622 bp Ori: ADU92829.1 Feature: domain Description: MFS_MdtG_MDR_like Location: 369420-370524 bp Feature: domain Description: MFS_MdtG_MDR_like Location: 369420-370524 bp Feature: gene Location: 371023-371676 bp Ori: ADU92830.1 Feature: domain Description: PspA Location: 371026-371665 bp Feature: domain Description: PspA Location: 371 026-371 665 bp Feature: gene Location: 586846-587040 bp Feature: gene Location: 587295-588566 bp Ori: ADU93036.1 Feature: domain Description: TlyC Location: 587334-588540 bp Feature: domain Description: TlyC Location: 587334-588540 bp Feature: gene Location: 589182-590444 bp Ori: ADU93037.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 589383-590001 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 589383-590001 bp Feature: domain Description: GIIM Note: maturase Location: 590049-590265 bp Feature: domain Description: GIIM Note: maturase Location: 590049-590265 bp Feature: gene Location: 590545-590757 bp Ori: ADU93038.1 Feature: domain Description: SASP Location: 590569-590731 bp Feature: domain Description: SASP Location: 590569-590731 bp Feature: gene Location: 591047-591289 bp Feature: gene Location: 1233457-1234701 bp Ori: ADU93671.1 Feature: domain Description: PRK00549 Location: 1233463-1234690 bp Feature: domain Description: PRK00549 Location: 1 233463-1 234690 bp Feature: gene Location: 1234880-1235278 bp Ori: ADU93672.1 Feature: domain Description: recA Location: 1234886-1235252 bp Feature: domain Description: recA Location: 1 234886-1 235252 bp Feature: gene Location: 1235962-1237869 bp Ori: ADU93673.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1236304-1237006 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 236304-1 237006 bp Feature: domain Description: HNHc Note: nucleases Location: 1237624-1237792 bp Feature: domain Description: HNHc Note: nucleases Location: 1 237624-1 237792 bp Feature: gene Location: 1237897-1238730 bp Ori: ADU93674.1 Feature: domain Description: recA Location: 1238059-1238689 bp Feature: domain Description: recA Location: 1 238059-1 238689 bp Feature: gene Location: 3214656-3215282 bp Feature: gene Location: 3215234-3215527 bp Feature: gene Location: 3217397-3218659 bp Ori: ADU95546.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3217598-3218216 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 321 7598-321 821 6 bp Feature: domain Description: GIIM Note: maturase Location: 3218264-3218480 bp Feature: domain Description: GIIM Note: maturase Location: 321 8264-321 8480 bp Feature: gene Location: 3219664-3220254 bp Ori: ADU95547.1 Feature: domain Description: VanZ Location: 3219694-3220219 bp Feature: domain Description: VanZ Location: 321 9694-322021 9 bp Feature: gene Location: 3221334-3222506 bp Ori: ADU95548.1 Feature: domain Description: HTH_Tnp_ISL3 Location: 3221604-3221745 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 3221 604-3221 745 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 3221787-3222480 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 3221 787-3222480 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DmpA (COG3191), RVT-GII, GIIM (pfam08388), MFS_MdtG_MDR_like (cd17391), PspA (COG1842), TlyC (COG1253), SASP (pfam00269), PRK00549 (competence damage-inducible protein A; Provisional), recA (PRK09519), HNHc (smart00507)
VanZ (pfam04892), HTH_Tnp_ISL3 (pfam13542), DDE_Tnp_ISL3 (pfam01610)