myRT

myRT report for GCA_000177235.2_ASM17723v2

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Seq: CP002394.1 Bacillus cellulosilyticus DSM 2522, complete genome (4681672 bp)
Overview 1 RT 1: 1305982-1318182 bp 2 RT 2: 1532362-1537140 bp 3 RT 3: 1806209-1811759 bp 4 RT 4: 1994481-1998443 bp 5 RT 5: 2156239-2162812 bp 6 RT 6: 2975872-2979283 bp 7 RT 7: 3077754-3082404 bp 8 RT 8: 3219403-3225998 bp 9 RT 9: 3237110-3240784 bp Neighborhood of RT #1 [1305982, 1318328] RVT-GII GIIM DnaC RVT-UG8 RVT-UG3 Tk-SP_N-pro Peptidases_S8_Subtilisin_subset FN3 FN3 PG_binding_1 PG_binding_1 PG_binding_1 PG_binding_1 PG_binding_1 PG_binding_1 COG3547 COG3547 Neighborhood of RT #2 [1532362, 1537145] TrmL RVT-GII GIIM Bile_Hydr_Trans BAAT_C HmoA Neighborhood of RT #3 [1806209, 1811815] PRK05339 RVT-GII GIIM PRK00124 dnaG Neighborhood of RT #4 [1994481, 1998469] ribH RVT-GII GIIM YpuF scpA Neighborhood of RT #5 [2156239, 2162913] M3B_PepF RVT-GII GIIM TauB Neighborhood of RT #6 [2975872, 2979283] SLT RVT-GII GIIM Neighborhood of RT #7 [3077754, 3082415] dTDP_gluc_dehyt DUF1360 RVT-GII GIIM PRK08594 Neighborhood of RT #8 [3219403, 3226078] PRK13922 PRK13927 RVT-GII HNHc RVT-GII recomb_XerC DNA_BRE_C Neighborhood of RT #9 [3237110, 3241050] RVT-UG8 asn_synth_AEB Feature: gene Location: 1305982-1306404 bp Feature: gene Location: 1306630-1306827 bp Feature: gene Location: 1306837-1307958 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1306885-1307578 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 306885-1 307578 bp Feature: domain Description: GIIM Note: maturase Location: 1307644-1307866 bp Feature: domain Description: GIIM Note: maturase Location: 1 307644-1 307866 bp Feature: gene Location: 1308597-1308956 bp Feature: domain Description: DnaC Location: 1308606-1308927 bp Feature: domain Description: DnaC Location: 1 308606-1 308927 bp Feature: gene Location: 1309037-1309171 bp Feature: gene Location: 1309486-1311423 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1309984-1310428 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1 309984-1 31 0428 bp Feature: gene Location: 1311707-1312879 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1311932-1312394 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1 31 1 932-1 31 2394 bp Feature: gene Location: 1313299-1316382 bp Feature: domain Description: Tk-SP_N-pro Location: 1313617-1313731 bp Feature: domain Description: Tk-SP_N-pro Location: 1 31 361 7-1 31 3731 bp Feature: domain Description: Peptidases_S8_Subtilisin_subset Location: 1313884-1314547 bp Feature: domain Description: Peptidases_S8_Subtilisin_subset Location: 1 31 3884-1 31 4547 bp Feature: domain Description: FN3 Location: 1314646-1314877 bp Feature: domain Description: FN3 Location: 1 31 4646-1 31 4877 bp Feature: domain Description: FN3 Location: 1314901-1315126 bp Feature: domain Description: FN3 Location: 1 31 4901 -1 31 51 26 bp Feature: domain Description: PG_binding_1 Location: 1315153-1315309 bp Feature: domain Description: PG_binding_1 Location: 1 31 51 53-1 31 5309 bp Feature: domain Description: PG_binding_1 Location: 1315372-1315525 bp Feature: domain Description: PG_binding_1 Location: 1 31 5372-1 31 5525 bp Feature: domain Description: PG_binding_1 Location: 1315573-1315735 bp Feature: domain Description: PG_binding_1 Location: 1 31 5573-1 31 5735 bp Feature: domain Description: PG_binding_1 Location: 1315792-1315945 bp Feature: domain Description: PG_binding_1 Location: 1 31 5792-1 31 5945 bp Feature: domain Description: PG_binding_1 Location: 1315990-1316155 bp Feature: domain Description: PG_binding_1 Location: 1 31 5990-1 31 61 55 bp Feature: domain Description: PG_binding_1 Location: 1316209-1316365 bp Feature: domain Description: PG_binding_1 Location: 1 31 6209-1 31 6365 bp Feature: gene Location: 1316919-1318328 bp Feature: domain Description: COG3547 Location: 1317168-1317477 bp Feature: domain Description: COG3547 Location: 1 31 71 68-1 31 7477 bp Feature: domain Description: COG3547 Location: 1317756-1318182 bp Feature: domain Description: COG3547 Location: 1 31 7756-1 31 81 82 bp Feature: gene Location: 1532362-1532844 bp Feature: domain Description: TrmL Location: 1532380-1532833 bp Feature: domain Description: TrmL Location: 1 532380-1 532833 bp Feature: gene Location: 1533172-1533303 bp Feature: gene Location: 1533531-1534856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1533798-1534419 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 533798-1 53441 9 bp Feature: domain Description: GIIM Note: maturase Location: 1534464-1534698 bp Feature: domain Description: GIIM Note: maturase Location: 1 534464-1 534698 bp Feature: gene Location: 1534951-1536228 bp Feature: domain Description: Bile_Hydr_Trans Location: 1534990-1535332 bp Feature: domain Description: Bile_Hydr_Trans Location: 1 534990-1 535332 bp Feature: domain Description: BAAT_C Location: 1535524-1536178 bp Feature: domain Description: BAAT_C Location: 1 535524-1 5361 78 bp Feature: gene Location: 1536840-1537145 bp Feature: domain Description: HmoA Location: 1536843-1537140 bp Feature: domain Description: HmoA Location: 1 536843-1 5371 40 bp Feature: gene Location: 1806209-1807021 bp Feature: domain Description: PRK05339 Location: 1806215-1807016 bp Feature: domain Description: PRK05339 Location: 1 80621 5-1 80701 6 bp Feature: gene Location: 1807345-1807476 bp Feature: gene Location: 1807704-1809029 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1807971-1808592 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 807971 -1 808592 bp Feature: domain Description: GIIM Note: maturase Location: 1808637-1808871 bp Feature: domain Description: GIIM Note: maturase Location: 1 808637-1 808871 bp Feature: gene Location: 1809407-1809862 bp Feature: domain Description: PRK00124 Location: 1809428-1809854 bp Feature: domain Description: PRK001 24 Location: 1 809428-1 809854 bp Feature: gene Location: 1810001-1811815 bp Feature: domain Description: dnaG Location: 1810019-1811759 bp Feature: domain Description: dnaG Location: 1 81 001 9-1 81 1 759 bp Feature: gene Location: 1994481-1994951 bp Feature: domain Description: ribH Location: 1994496-1994946 bp Feature: domain Description: ribH Location: 1 994496-1 994946 bp Feature: gene Location: 1995279-1995410 bp Feature: gene Location: 1995638-1996963 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1995905-1996526 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 995905-1 996526 bp Feature: domain Description: GIIM Note: maturase Location: 1996571-1996805 bp Feature: domain Description: GIIM Note: maturase Location: 1 996571 -1 996805 bp Feature: gene Location: 1997039-1997545 bp Feature: domain Description: YpuF Location: 1997051-1997537 bp Feature: domain Description: YpuF Location: 1 997051 -1 997537 bp Feature: gene Location: 1997603-1998469 bp Feature: domain Description: scpA Location: 1997708-1998443 bp Feature: domain Description: scpA Location: 1 997708-1 998443 bp Feature: gene Location: 2156239-2158056 bp Feature: domain Description: M3B_PepF Location: 2156272-2158036 bp Feature: domain Description: M3B_PepF Location: 21 56272-21 58036 bp Feature: gene Location: 2158066-2158575 bp Feature: gene Location: 2158692-2160086 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2159016-2159631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 5901 6-21 59631 bp Feature: domain Description: GIIM Note: maturase Location: 2159688-2159913 bp Feature: domain Description: GIIM Note: maturase Location: 21 59688-21 5991 3 bp Feature: gene Location: 2160183-2161730 bp Feature: gene Location: 2162068-2162913 bp Feature: domain Description: TauB Location: 2162074-2162812 bp Feature: domain Description: TauB Location: 21 62074-21 6281 2 bp Feature: gene Location: 2975872-2976171 bp Feature: gene Location: 2976312-2977103 bp Feature: domain Description: SLT Location: 2976696-2977038 bp Feature: domain Description: SLT Location: 2976696-2977038 bp Feature: gene Location: 2977219-2978544 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2977486-2978107 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2977486-29781 07 bp Feature: domain Description: GIIM Note: maturase Location: 2978152-2978386 bp Feature: domain Description: GIIM Note: maturase Location: 29781 52-2978386 bp Feature: gene Location: 2978772-2978903 bp Feature: gene Location: 2978930-2979283 bp Feature: gene Location: 3077754-3078677 bp Feature: domain Description: dTDP_gluc_dehyt Location: 3077763-3078648 bp Feature: domain Description: dTDP_gluc_dehyt Location: 3077763-3078648 bp Feature: gene Location: 3078739-3079089 bp Feature: domain Description: DUF1360 Location: 3078769-3079072 bp Feature: domain Description: DUF1 360 Location: 3078769-3079072 bp Feature: gene Location: 3079624-3080949 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3079891-3080512 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3079891 -308051 2 bp Feature: domain Description: GIIM Note: maturase Location: 3080557-3080791 bp Feature: domain Description: GIIM Note: maturase Location: 3080557-3080791 bp Feature: gene Location: 3081177-3081308 bp Feature: gene Location: 3081636-3082415 bp Feature: domain Description: PRK08594 Location: 3081642-3082404 bp Feature: domain Description: PRK08594 Location: 3081 642-3082404 bp Feature: gene Location: 3219403-3220347 bp Feature: domain Description: PRK13922 Location: 3219406-3220234 bp Feature: domain Description: PRK1 3922 Location: 321 9406-3220234 bp Feature: gene Location: 3220363-3221403 bp Feature: domain Description: PRK13927 Location: 3220372-3221365 bp Feature: domain Description: PRK1 3927 Location: 3220372-3221 365 bp Feature: gene Location: 3221959-3223077 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3222013-3222235 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 322201 3-3222235 bp Feature: domain Description: HNHc Note: nucleases Location: 3222829-3222997 bp Feature: domain Description: HNHc Note: nucleases Location: 3222829-3222997 bp Feature: gene Location: 3223078-3223830 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3223399-3223828 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3223399-3223828 bp Feature: gene Location: 3224398-3224628 bp Feature: gene Location: 3224834-3226078 bp Feature: domain Description: recomb_XerC Location: 3225101-3225350 bp Feature: domain Description: recomb_XerC Location: 32251 01 -3225350 bp Feature: domain Description: DNA_BRE_C Location: 3225449-3225998 bp Feature: domain Description: DNA_BRE_C Location: 3225449-3225998 bp Feature: gene Location: 3237110-3237397 bp Feature: gene Location: 3237506-3237649 bp Feature: gene Location: 3237752-3238471 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 3237758-3238019 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 3237758-323801 9 bp Feature: gene Location: 3238537-3238716 bp Feature: gene Location: 3239158-3241050 bp Feature: domain Description: asn_synth_AEB Location: 3239188-3240784 bp Feature: domain Description: asn_synth_AEB Location: 32391 88-3240784 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DnaC (COG1484), RVT-UG8, RVT-UG3, Tk-SP_N-pro (pfam18237), Peptidases_S8_Subtilisin_subset (cd07477), FN3 (smart00060), PG_binding_1 (pfam01471), COG3547 (Transposase )
TrmL (COG0219), Bile_Hydr_Trans (pfam04775), BAAT_C (pfam08840), HmoA (COG2329), PRK05339 (pyruvate, phosphate dikinase/phosphoenolpyruvate synthase regulator), PRK00124 (YaiI/YqxD family protein), dnaG (TIGR01391), ribH (PRK00061), YpuF (COG1547), scpA (PRK00478)
M3B_PepF (cd09610), TauB (COG4525), SLT (pfam01464), dTDP_gluc_dehyt (TIGR01181), DUF1360 (pfam07098), PRK08594 (enoyl- reductase FabI), PRK13922 (rod shape-determining protein MreC; Provisional), PRK13927 (rod shape-determining protein MreB; Provisional), HNHc (smart00507), recomb_XerC (TIGR02224)
DNA_BRE_C (cl00213), asn_synth_AEB (TIGR01536)