myRT

myRT report for GCA_000179015.2_ASM17901v2

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Seq: CP002449.1 Alicycliphilus denitrificans BC, complete genome (4637013 bp)
Overview 1 RT 1: 276176-278556 bp 2 RT 2: 3728445-3732280 bp Neighborhood of RT #1 [276176, 278573] HTH_XRE RVT-Retrons COG3636 COG3657 Neighborhood of RT #2 [3728445, 3732280] Avd_like RVT-DGRs DUF5131 Feature: gene Location: 276176-276409 bp Feature: gene Location: 276459-276767 bp Ori: ADU98034.1 Feature: domain Description: HTH_XRE Location: 276471-276621 bp Feature: domain Description: HTH_XRE Location: 276471 -276621 bp Feature: gene Location: 276730-277758 bp Ori: ADU98035.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 276877-277429 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 276877-277429 bp Feature: gene Location: 277930-278247 bp Ori: ADU98036.1 Feature: domain Description: COG3636 Location: 277936-278218 bp Feature: domain Description: COG3636 Location: 277936-27821 8 bp Feature: gene Location: 278244-278573 bp Ori: ADU98037.1 Feature: domain Description: COG3657 Location: 278262-278556 bp Feature: domain Description: COG3657 Location: 278262-278556 bp Feature: gene Location: 3728445-3729059 bp Feature: gene Location: 3729113-3729505 bp Ori: ADV01303.1 Feature: domain Description: Avd_like Location: 3729140-3729461 bp Feature: domain Description: Avd_like Location: 37291 40-3729461 bp Feature: gene Location: 3729772-3730908 bp Ori: ADV01304.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3729988-3730735 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3729988-3730735 bp Feature: gene Location: 3730905-3731951 bp Ori: ADV01305.1 Feature: domain Description: DUF5131 Location: 3730917-3731853 bp Feature: domain Description: DUF51 31 Location: 373091 7-3731 853 bp Feature: gene Location: 3731948-3732280 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons, COG3636 (DNA-binding prophage protein ), COG3657 (Putative component of the toxin-antitoxin plasmid stabilization module ), Avd_like (cd16376), RVT-DGRs, DUF5131 (pfam07505)