myRT

myRT report for GCA_000184685.1_ASM18468v1

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Seq: CP002343.1 Intrasporangium calvum DSM 43043, complete genome (4024382 bp)
Overview 1 RT 1: 950576-959495 bp Neighborhood of RT #1 [950576, 959635] XerD Phage_int_SAM_1 INT_RitA_C_like COG3464 RVT-GII GIIM YjiC AcrR Feature: gene Location: 950576-952111 bp Ori: ADU47403.1 Feature: domain Description: XerD Location: 950969-951161 bp Feature: domain Description: XerD Location: 950969-951 1 61 bp Feature: domain Description: Phage_int_SAM_1 Location: 951233-951473 bp Feature: domain Description: Phage_int_SAM_1 Location: 951 233-951 473 bp Feature: domain Description: INT_RitA_C_like Location: 951563-952082 bp Feature: domain Description: INT_RitA_C_like Location: 951 563-952082 bp Feature: gene Location: 953005-954267 bp Ori: ADU47404.1 Feature: domain Description: COG3464 Location: 953056-954229 bp Feature: domain Description: COG3464 Location: 953056-954229 bp Feature: gene Location: 954545-956038 bp Ori: ADU47405.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 954881-955571 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 954881 -955571 bp Feature: domain Description: GIIM Note: maturase Location: 955643-955865 bp Feature: domain Description: GIIM Note: maturase Location: 955643-955865 bp Feature: gene Location: 957548-958879 bp Ori: ADU47406.1 Feature: domain Description: YjiC Location: 957551-958820 bp Feature: domain Description: YjiC Location: 957551 -958820 bp Feature: gene Location: 958964-959635 bp Ori: ADU47407.1 Feature: domain Description: AcrR Location: 959000-959495 bp Feature: domain Description: AcrR Location: 959000-959495 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT XerD (COG4974), Phage_int_SAM_1 (pfam02899), INT_RitA_C_like (cd01188), COG3464 (Transposase ), RVT-GII, GIIM (pfam08388), YjiC (COG1819), AcrR (COG1309)