myRT

myRT report for GCA_000189775.3_ASM18977v3

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Seq: CP002739.1 Thermoanaerobacterium xylanolyticum LX-11, complete genome (2534358 bp)
Overview 1 RT 1: 46332-53996 bp 2 RT 2: 199060-204110 bp 3 RT 3: 1113603-1119109 bp 4 RT 4: 1833914-1839786 bp 5 RT 5: 2215185-2220637 bp Neighborhood of RT #1 [46332, 54052] PRK10060 RVT-GII GIIM TadA HK_WalK PAS HDGYP Neighborhood of RT #2 [199060, 204139] PRK00901 Thia_YuaJ RVT-GII GIIM GT28_Beta-DGS-like PAP2_like_4 Neighborhood of RT #3 [1113603, 1119126] SMC_prok_A RVT-GII GIIM GT4_WbuB-like CsoR-like_DUF156 Neighborhood of RT #4 [1833914, 1839809] UPF0236 COG3547 Transposase_20 RVT-AbiA YwgA YdhJ Neighborhood of RT #5 [2215185, 2220669] ECF_T_CbiQ ABC_cobalt_CbiO_domain1 RVT-GII GIIM MFS_FucP_MFSD4_like AcrR PRK09975 Feature: gene Location: 46332-47609 bp Ori: AEF16104.1 Feature: domain Description: PRK10060 Location: 46377-47598 bp Feature: domain Description: PRK1 0060 Location: 46377-47598 bp Feature: gene Location: 47778-48050 bp Feature: gene Location: 48439-49845 bp Ori: AEF16106.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48787-49405 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48787-49405 bp Feature: domain Description: GIIM Note: maturase Location: 49456-49672 bp Feature: domain Description: GIIM Note: maturase Location: 49456-49672 bp Feature: gene Location: 50991-51404 bp Ori: AEF16107.1 Feature: domain Description: TadA Location: 50994-51393 bp Feature: domain Description: TadA Location: 50994-51 393 bp Feature: gene Location: 52160-54052 bp Ori: AEF16108.1 Feature: domain Description: HK_WalK Location: 52268-52508 bp Feature: domain Description: HK_WalK Location: 52268-52508 bp Feature: domain Description: PAS Location: 52610-52769 bp Feature: domain Description: PAS Location: 5261 0-52769 bp Feature: domain Description: HDGYP Location: 52769-53996 bp Feature: domain Description: HDGYP Location: 52769-53996 bp Feature: gene Location: 199060-199527 bp Ori: AEF16247.1 Feature: domain Description: PRK00901 Location: 199081-199507 bp Feature: domain Description: PRK00901 Location: 1 99081 -1 99507 bp Feature: gene Location: 199720-200358 bp Ori: AEF16248.1 Feature: domain Description: Thia_YuaJ Location: 199858-200320 bp Feature: domain Description: Thia_YuaJ Location: 1 99858-200320 bp Feature: gene Location: 200820-202226 bp Ori: AEF16249.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 201168-201786 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 201 1 68-201 786 bp Feature: domain Description: GIIM Note: maturase Location: 201837-202053 bp Feature: domain Description: GIIM Note: maturase Location: 201 837-202053 bp Feature: gene Location: 202468-203583 bp Ori: AEF16250.1 Feature: domain Description: GT28_Beta-DGS-like Location: 202486-203554 bp Feature: domain Description: GT28_Beta-DGS-like Location: 202486-203554 bp Feature: gene Location: 203597-204139 bp Ori: AEF16251.1 Feature: domain Description: PAP2_like_4 Location: 203633-204110 bp Feature: domain Description: PAP2_like_4 Location: 203633-2041 1 0 bp Feature: gene Location: 1113603-1114973 bp Ori: AEF17072.1 Feature: domain Description: SMC_prok_A Location: 1114605-1114905 bp Feature: domain Description: SMC_prok_A Location: 1 1 1 4605-1 1 1 4905 bp Feature: gene Location: 1115101-1115769 bp Feature: gene Location: 1116226-1117632 bp Ori: AEF17074.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1116574-1117192 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 1 6574-1 1 1 71 92 bp Feature: domain Description: GIIM Note: maturase Location: 1117243-1117459 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 1 7243-1 1 1 7459 bp Feature: gene Location: 1117735-1118847 bp Ori: AEF17075.1 Feature: domain Description: GT4_WbuB-like Location: 1117960-1118794 bp Feature: domain Description: GT4_WbuB-like Location: 1 1 1 7960-1 1 1 8794 bp Feature: gene Location: 1118860-1119126 bp Ori: AEF17076.1 Feature: domain Description: CsoR-like_DUF156 Location: 1118878-1119109 bp Feature: domain Description: CsoR-like_DUF1 56 Location: 1 1 1 8878-1 1 1 91 09 bp Feature: gene Location: 1833914-1835323 bp Ori: AEF17795.1 Feature: domain Description: UPF0236 Location: 1833968-1835228 bp Feature: domain Description: UPF0236 Location: 1 833968-1 835228 bp Feature: gene Location: 1835623-1836906 bp Ori: AEF17796.1 Feature: domain Description: COG3547 Location: 1835677-1836310 bp Feature: domain Description: COG3547 Location: 1 835677-1 83631 0 bp Feature: domain Description: Transposase_20 Location: 1836496-1836736 bp Feature: domain Description: Transposase_20 Location: 1 836496-1 836736 bp Feature: gene Location: 1837008-1837916 bp Ori: AEF17797.1 Feature: RT Description: RVT-AbiA Note: AbiA RT Location: 1837353-1837881 bp Feature: RT Description: RVT-AbiA Note: AbiA RT Location: 1 837353-1 837881 bp Feature: gene Location: 1838039-1838554 bp Ori: AEF17798.1 Feature: domain Description: YwgA Location: 1838051-1838525 bp Feature: domain Description: YwgA Location: 1 838051 -1 838525 bp Feature: gene Location: 1838547-1839809 bp Ori: AEF17799.1 Feature: domain Description: YdhJ Location: 1838550-1839786 bp Feature: domain Description: YdhJ Location: 1 838550-1 839786 bp Feature: gene Location: 2215185-2216015 bp Ori: AEF18135.1 Feature: domain Description: ECF_T_CbiQ Location: 2215290-2215887 bp Feature: domain Description: ECF_T_CbiQ Location: 221 5290-221 5887 bp Feature: gene Location: 2216006-2216740 bp Ori: AEF18136.1 Feature: domain Description: ABC_cobalt_CbiO_domain1 Location: 2216024-2216657 bp Feature: domain Description: ABC_cobalt_CbiO_domain1 Location: 221 6024-221 6657 bp Feature: gene Location: 2216812-2218218 bp Ori: AEF18137.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2217160-2217778 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 221 71 60-221 7778 bp Feature: domain Description: GIIM Note: maturase Location: 2217829-2218045 bp Feature: domain Description: GIIM Note: maturase Location: 221 7829-221 8045 bp Feature: gene Location: 2218669-2219814 bp Ori: AEF18138.1 Feature: domain Description: MFS_FucP_MFSD4_like Location: 2218699-2219776 bp Feature: domain Description: MFS_FucP_MFSD4_like Location: 221 8699-221 9776 bp Feature: gene Location: 2220079-2220669 bp Ori: AEF18139.1 Feature: domain Description: AcrR Location: 2220118-2220331 bp Feature: domain Description: AcrR Location: 22201 1 8-2220331 bp Feature: domain Description: PRK09975 Location: 2220466-2220637 bp Feature: domain Description: PRK09975 Location: 2220466-2220637 bp Sorry, your browser does not support inline SVG.
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