myRT

myRT report for GCA_000192865.1_ASM19286v1

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Seq: CP002583.1 Marinomonas mediterranea MMB-1, complete genome (4684316 bp)
Overview 1 RT 1: 657721-661176 bp 2 RT 2: 698322-702859 bp Neighborhood of RT #1 [657721, 661274] TnpB_IS66 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 RVT-GII GIIM Neighborhood of RT #2 [698322, 702859] Cas2_I_II_III Cas6-I-III RVT-CRISPR Cas_Cas1 Feature: gene Location: 657721-658083 bp Ori: ADZ89920.1 Feature: domain Description: TnpB_IS66 Location: 657748-658036 bp Feature: domain Description: TnpB_IS66 Location: 657748-658036 bp Feature: gene Location: 658073-659557 bp Ori: ADZ89921.1 Feature: domain Description: LZ_Tnp_IS66 Location: 658268-658466 bp Feature: domain Description: LZ_Tnp_IS66 Location: 658268-658466 bp Feature: domain Description: zf-IS66 Location: 658490-658622 bp Feature: domain Description: zf-IS66 Location: 658490-658622 bp Feature: domain Description: DDE_Tnp_IS66 Location: 658682-659519 bp Feature: domain Description: DDE_Tnp_IS66 Location: 658682-65951 9 bp Feature: gene Location: 660024-661274 bp Ori: ADZ89922.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 660225-660882 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 660225-660882 bp Feature: domain Description: GIIM Note: maturase Location: 660960-661176 bp Feature: domain Description: GIIM Note: maturase Location: 660960-661 1 76 bp Feature: gene Location: 698322-698600 bp Ori: ADZ89952.1 Feature: domain Description: Cas2_I_II_III Location: 698334-698562 bp Feature: domain Description: Cas2_I_II_III Location: 698334-698562 bp Feature: gene Location: 698597-701470 bp Ori: ADZ89953.1 Feature: domain Description: Cas6-I-III Location: 698750-699464 bp Feature: domain Description: Cas6-I-III Location: 698750-699464 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 699716-700322 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 69971 6-700322 bp Feature: domain Description: Cas_Cas1 Location: 700523-701342 bp Feature: domain Description: Cas_Cas1 Location: 700523-701 342 bp Feature: gene Location: 701479-702249 bp Feature: gene Location: 702290-702859 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), RVT-GII, GIIM (pfam08388), Cas2_I_II_III (cl11442), Cas6-I-III (cl09782), RVT-CRISPR, Cas_Cas1 (pfam01867)