myRT

myRT report for GCA_000196495.1_ASM19649v1

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Seq: FM178379.1 Aliivibrio salmonicida LFI1238 chromosome 1 complete genome (3325165 bp)
Overview 1 RT 1: 2214121-2221658 bp Neighborhood of RT #1 [2214121, 2221753] CBS_pair_bac RVT-GII GIIM zntA HDGYP HDGYP Feature: gene Location: 2214121-2214540 bp Ori: CAQ79749.1 Feature: domain Description: CBS_pair_bac Location: 2214154-2214499 bp Feature: domain Description: CBS_pair_bac Location: 221 41 54-221 4499 bp Feature: gene Location: 2214988-2215143 bp Feature: gene Location: 2215436-2216650 bp Ori: CAQ79751.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2215619-2216219 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 221 561 9-221 621 9 bp Feature: domain Description: GIIM Note: maturase Location: 2216261-2216483 bp Feature: domain Description: GIIM Note: maturase Location: 221 6261 -221 6483 bp Feature: gene Location: 2216849-2219170 bp Ori: CAQ79752.1 Gene: zntA Feature: domain Description: zntA Location: 2216897-2219162 bp Feature: domain Description: zntA Location: 221 6897-221 91 62 bp Feature: gene Location: 2219231-2221753 bp Ori: CAQ79753.1 Feature: domain Description: HDGYP Location: 2220386-2220851 bp Feature: domain Description: HDGYP Location: 2220386-2220851 bp Feature: domain Description: HDGYP Location: 2221313-2221658 bp Feature: domain Description: HDGYP Location: 2221 31 3-2221 658 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CBS_pair_bac (cd17788), RVT-GII, GIIM (pfam08388), zntA (PRK11033), HDGYP (COG2206)

Seq: FM178380.1 Aliivibrio salmonicida LFI1238 chromosome 2 complete genome (1206461 bp)
Overview 1 RT 1: 605386-608508 bp Neighborhood of RT #1 [605386, 608508] YafQ RelB RVT-UG15 Feature: gene Location: 605386-605655 bp Ori: CAQ81301.1 Feature: domain Description: YafQ Location: 605389-605653 bp Feature: domain Description: YafQ Location: 605389-605653 bp Feature: gene Location: 605648-605926 bp Ori: CAQ81302.1 Feature: domain Description: RelB Location: 605657-605897 bp Feature: domain Description: RelB Location: 605657-605897 bp Feature: gene Location: 606153-607745 bp Ori: CAQ81303.1 Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 606567-606981 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 606567-606981 bp Feature: gene Location: 607773-608144 bp Feature: gene Location: 608314-608508 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YafQ (COG3041), RelB (pfam04221), RVT-UG15