myRT

myRT report for GCA_000196675.1_ASM19667v1

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Seq: CP002593.1 Pseudonocardia dioxanivorans CB1190, complete genome (7096571 bp)
Overview 1 RT 1: 32906-41730 bp 2 RT 2: 3103694-3110079 bp Neighborhood of RT #1 [32906, 41780] DUF2637 TrwC AAA_30 RVT-GII GIIM HTH_ARSR Neighborhood of RT #2 [3103694, 3110114] TauE DUF222 HNH RVT-Retrons SGNH_hydrolase_yrhL_like HAD_ScGPP-like Feature: gene Location: 32906-33823 bp Ori: AEA22316.1 Feature: domain Description: DUF2637 Location: 32957-33212 bp Feature: domain Description: DUF2637 Location: 32957-3321 2 bp Feature: gene Location: 34056-38453 bp Ori: AEA22317.1 Feature: domain Description: TrwC Location: 34095-35172 bp Feature: domain Description: TrwC Location: 34095-351 72 bp Feature: domain Description: AAA_30 Location: 35667-36279 bp Feature: domain Description: AAA_30 Location: 35667-36279 bp Feature: gene Location: 38992-40461 bp Ori: AEA22318.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39334-40030 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39334-40030 bp Feature: domain Description: GIIM Note: maturase Location: 40099-40321 bp Feature: domain Description: GIIM Note: maturase Location: 40099-40321 bp Feature: gene Location: 40461-40649 bp Feature: gene Location: 41442-41780 bp Ori: AEA22320.1 Feature: domain Description: HTH_ARSR Location: 41514-41730 bp Feature: domain Description: HTH_ARSR Location: 41 51 4-41 730 bp Feature: gene Location: 3103694-3104458 bp Ori: AEA25136.1 Feature: domain Description: TauE Location: 3103733-3104441 bp Feature: domain Description: TauE Location: 31 03733-31 04441 bp Feature: gene Location: 3105525-3106853 bp Ori: AEA25137.1 Feature: domain Description: DUF222 Location: 3105630-3106557 bp Feature: domain Description: DUF222 Location: 31 05630-31 06557 bp Feature: domain Description: HNH Note: nucleases Location: 3106566-3106692 bp Feature: domain Description: HNH Note: nucleases Location: 31 06566-31 06692 bp Feature: gene Location: 3107236-3108474 bp Ori: AEA25138.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3107626-3108244 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 31 07626-31 08244 bp Feature: gene Location: 3108664-3109389 bp Ori: AEA25139.1 Feature: domain Description: SGNH_hydrolase_yrhL_like Location: 3108931-3109372 bp Feature: domain Description: SGNH_hydrolase_yrhL_like Location: 31 08931 -31 09372 bp Feature: gene Location: 3109464-3110114 bp Ori: AEA25140.1 Feature: domain Description: HAD_ScGPP-like Location: 3109506-3110079 bp Feature: domain Description: HAD_ScGPP-like Location: 31 09506-31 1 0079 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2637 (pfam10935), TrwC (pfam08751), AAA_30 (pfam13604), RVT-GII, GIIM (pfam08388), HTH_ARSR (smart00418), TauE (pfam01925), DUF222 (pfam02720), HNH (pfam01844), RVT-Retrons
SGNH_hydrolase_yrhL_like (cd01840), HAD_ScGPP-like (cd07527)