myRT

myRT report for GCA_000204075.1_ASM20407v1

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Seq: CP000117.1 Anabaena variabilis ATCC 29413, complete genome (6365727 bp)
Overview 1 RT 1: 4046496-4057483 bp Neighborhood of RT #1 [4046496, 4057503] YprA YprA YprA RVT-Retrons AlbA_2 TPR TPR sporadsporadsporadTIGR04255 Feature: gene Location: 4046496-4047422 bp Feature: gene Location: 4047419-4053700 bp Ori: ABA22861.1 Feature: domain Description: YprA Location: 4047500-4048511 bp Feature: domain Description: YprA Location: 4047500-404851 1 bp Feature: domain Description: YprA Location: 4050602-4051037 bp Feature: domain Description: YprA Location: 4050602-4051 037 bp Feature: domain Description: YprA Location: 4052375-4052672 bp Feature: domain Description: YprA Location: 4052375-4052672 bp Feature: gene Location: 4053718-4054812 bp Ori: ABA22862.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4053901-4054504 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4053901 -4054504 bp Feature: gene Location: 4055043-4056107 bp Ori: ABA22863.1 Feature: domain Description: AlbA_2 Location: 4055094-4055523 bp Feature: domain Description: AlbA_2 Location: 4055094-4055523 bp Feature: domain Description: TPR Location: 4055634-4055904 bp Feature: domain Description: TPR Location: 4055634-4055904 bp Feature: domain Description: TPR Location: 4055958-4056039 bp Feature: domain Description: TPR Location: 4055958-4056039 bp Feature: gene Location: 4056742-4057503 bp Ori: ABA22864.1 Feature: domain Description: sporadsporadsporadTIGR04255 Location: 4056757-4057483 bp Feature: domain Description: sporadsporadsporadTIGR04255 Location: 4056757-4057483 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YprA (COG1205), RVT-Retrons, AlbA_2 (pfam04326), TPR (smart00028), sporadsporadsporadTIGR04255

Seq: CP000121.1 Anabaena variabilis ATCC 29413 plasmid C, complete sequence (300758 bp)
Overview 1 RT 1: 49404-56349 bp Neighborhood of RT #1 [49404, 56708] COG1430 RVT_N RVT-GII GIIM McrA VirB4_CagE Feature: gene Location: 49404-49970 bp Ori: ABA25120.1 Feature: domain Description: COG1430 Location: 49596-49956 bp Feature: domain Description: COG1430 Location: 49596-49956 bp Feature: gene Location: 50342-50872 bp Feature: gene Location: 51340-53223 bp Ori: ABA25122.1 Feature: domain Description: RVT_N Location: 51514-51760 bp Feature: domain Description: RVT_N Location: 51514-51760 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51802-52480 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51802 -52 480 bp Feature: domain Description: GIIM Note: maturase Location: 52582-52813 bp Feature: domain Description: GIIM Note: maturase Location: 52 582 -52 813 bp Feature: domain Description: McrA Location: 52897-53164 bp Feature: domain Description: McrA Location: 52 897-53164 bp Feature: gene Location: 53523-53858 bp Feature: gene Location: 53901-56708 bp Ori: ABA25124.1 Feature: domain Description: VirB4_CagE Location: 54945-56349 bp Feature: domain Description: VirB4_CagE Location: 54945-56349 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG1430 (Uncharacterized conserved membrane protein, UPF0127 family ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), VirB4_CagE (TIGR00929)

Seq: CP000119.1 Anabaena variabilis ATCC 29413 plasmid A, complete sequence (366354 bp)
Overview 1 RT 1: 21176-28761 bp Neighborhood of RT #1 [21176, 29135] recomb_XerC RVT_N RVT-GII GIIM McrA PRK13541 VirB4_CagE Feature: gene Location: 21176-22138 bp Ori: ABA24726.1 Feature: domain Description: recomb_XerC Location: 21296-22061 bp Feature: domain Description: recomb_XerC Location: 21296-22061 bp Feature: gene Location: 22640-23176 bp Feature: gene Location: 23644-25527 bp Ori: ABA24728.1 Feature: domain Description: RVT_N Location: 23818-24064 bp Feature: domain Description: RVT_N Location: 23 818-24064 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24106-24784 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24106-24784 bp Feature: domain Description: GIIM Note: maturase Location: 24886-25117 bp Feature: domain Description: GIIM Note: maturase Location: 24886-25117 bp Feature: domain Description: McrA Location: 25201-25468 bp Feature: domain Description: McrA Location: 25201-25468 bp Feature: gene Location: 25998-26297 bp Feature: gene Location: 26319-29135 bp Ori: ABA24730.1 Feature: domain Description: PRK13541 Location: 27423-27642 bp Feature: domain Description: PRK13 541 Location: 27423 -27642 bp Feature: domain Description: VirB4_CagE Location: 27777-28761 bp Feature: domain Description: VirB4_CagE Location: 27777-28761 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT recomb_XerC (TIGR02224), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), PRK13541 (cytochrome c biogenesis protein CcmA; Provisional), VirB4_CagE (TIGR00929)