myRT

myRT report for GCA_000204565.1_ASM20456v1

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Seq: CP002413.1 Clostridium botulinum BKT015925 plasmid p3BKT015925, complete sequence (80365 bp)
Overview 1 RT 1: 67979-73603 bp Neighborhood of RT #1 [67979, 73641] HTH_3 COG4584 PRK09183 RVT-GII GIIM GDPD_EcGlpQ_like Feature: gene Location: 67979-69199 bp Ori: AEB77597.1 Feature: domain Description: HTH_3 Location: 68075-68162 bp Feature: domain Description: HTH_3 Location: 68075-681 62 bp Feature: domain Description: COG4584 Location: 68393-68783 bp Feature: domain Description: COG4584 Location: 68393-68783 bp Feature: gene Location: 69324-69983 bp Ori: AEB77598.1 Feature: domain Description: PRK09183 Location: 69333-69978 bp Feature: domain Description: PRK091 83 Location: 69333-69978 bp Feature: gene Location: 70133-71284 bp Ori: AEB77599.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 70382-71000 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 70382-71 000 bp Feature: domain Description: GIIM Note: maturase Location: 71054-71264 bp Feature: domain Description: GIIM Note: maturase Location: 71 054-71 264 bp Feature: gene Location: 71866-72324 bp Feature: gene Location: 72532-73641 bp Ori: AEB77601.1 Feature: domain Description: GDPD_EcGlpQ_like Location: 72685-73603 bp Feature: domain Description: GDPD_EcGlpQ_like Location: 72685-73603 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_3 (pfam01381), COG4584 (Transposase ), PRK09183 (transposase/IS protein; Provisional), RVT-GII, GIIM (pfam08388), GDPD_EcGlpQ_like (cd08600)

Seq: CP002410.1 Clostridium botulinum BKT015925, complete genome (2773157 bp)
Overview 1 RT 1: 969622-974557 bp 2 RT 2: 1134632-1139837 bp 3 RT 3: 1492621-1497874 bp 4 RT 4: 1679104-1685113 bp 5 RT 5: 2204702-2209304 bp 6 RT 6: 2565637-2571228 bp Neighborhood of RT #1 [969622, 974571] PRK09183 HTH_3 COG4584 RVT-GII GIIM P_permease Neighborhood of RT #2 [1134632, 1139851] PRK09183 HTH_3 COG4584 RVT-GII RVT-GII GIIM spore_V_AC SpoVAD Neighborhood of RT #3 [1492621, 1497882] Uup GIIM RVT-GII PerM TIGR03987 Neighborhood of RT #4 [1679104, 1685121] FeoA PRK03902 RVT-GII GIIM PRK12446 SASP Neighborhood of RT #5 [2204702, 2209786] RVT-GII GIIM PRK09183 HTH_3 COG4584 Neighborhood of RT #6 [2565637, 2571233] COG3581 COG3580 RVT-GII GIIM RhaT NapH Feature: gene Location: 969622-970374 bp Ori: AEB75563.1 Feature: domain Description: PRK09183 Location: 969628-970360 bp Feature: domain Description: PRK09183 Location: 96962 8-970360 bp Feature: gene Location: 970377-971663 bp Ori: AEB75564.1 Feature: domain Description: HTH_3 Location: 970473-970560 bp Feature: domain Description: HTH_3 Location: 970473-970560 bp Feature: domain Description: COG4584 Location: 970791-971181 bp Feature: domain Description: COG4584 Location: 970791-971181 bp Feature: gene Location: 971805-973166 bp Ori: AEB75565.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 972105-972720 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 972 105-972 72 0 bp Feature: domain Description: GIIM Note: maturase Location: 972774-972993 bp Feature: domain Description: GIIM Note: maturase Location: 972 774-972 993 bp Feature: gene Location: 973245-973526 bp Feature: gene Location: 973777-974571 bp Ori: AEB75567.1 Feature: domain Description: P_permease Location: 973780-974557 bp Feature: domain Description: P_permease Location: 973780-974557 bp Feature: gene Location: 1134632-1135384 bp Ori: AEB75700.1 Feature: domain Description: PRK09183 Location: 1134638-1135370 bp Feature: domain Description: PRK09183 Location: 1134638-1135370 bp Feature: gene Location: 1135387-1136676 bp Ori: AEB75701.1 Feature: domain Description: HTH_3 Location: 1135483-1135570 bp Feature: domain Description: HTH_3 Location: 1135483-1135570 bp Feature: domain Description: COG4584 Location: 1135804-1136194 bp Feature: domain Description: COG4584 Location: 1135804-1136194 bp Feature: gene Location: 1136818-1137564 bp Ori: AEB75702.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1137118-1137556 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1137118-1137556 bp Feature: gene Location: 1137545-1138180 bp Ori: AEB75703.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1137554-1137734 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1137554-1137734 bp Feature: domain Description: GIIM Note: maturase Location: 1137788-1138007 bp Feature: domain Description: GIIM Note: maturase Location: 1137788-1138007 bp Feature: gene Location: 1138347-1138799 bp Ori: AEB75704.1 Feature: domain Description: spore_V_AC Location: 1138377-1138791 bp Feature: domain Description: spore_V_AC Location: 1138377-1138791 bp Feature: gene Location: 1138835-1139851 bp Ori: AEB75705.1 Feature: domain Description: SpoVAD Location: 1138853-1139837 bp Feature: domain Description: SpoVAD Location: 1138853-1139837 bp Feature: gene Location: 1492621-1494153 bp Ori: AEB76083.1 Feature: domain Description: Uup Location: 1492627-1494133 bp Feature: domain Description: Uup Location: 1492 62 7-1494133 bp Feature: gene Location: 1494403-1494843 bp Ori: AEB76084.1 Feature: domain Description: GIIM Note: maturase Location: 1494451-1494670 bp Feature: domain Description: GIIM Note: maturase Location: 1494451-1494670 bp Feature: gene Location: 1494809-1495756 bp Ori: AEB76085.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1495097-1495715 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1495097-1495715 bp Feature: gene Location: 1496290-1497399 bp Ori: AEB76086.1 Feature: domain Description: PerM Location: 1496374-1497376 bp Feature: domain Description: PerM Location: 1496374-1497376 bp Feature: gene Location: 1497514-1497882 bp Ori: AEB76087.1 Feature: domain Description: TIGR03987 Location: 1497520-1497874 bp Feature: domain Description: TIGR03987 Location: 149752 0-1497874 bp Feature: gene Location: 1679104-1679352 bp Ori: AEB76260.1 Feature: domain Description: FeoA Location: 1679134-1679344 bp Feature: domain Description: FeoA Location: 1679134-1679344 bp Feature: gene Location: 1679540-1680001 bp Ori: AEB76261.1 Feature: domain Description: PRK03902 Location: 1679600-1679996 bp Feature: domain Description: PRK03902 Location: 1679600-1679996 bp Feature: gene Location: 1681704-1683125 bp Ori: AEB76262.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1682061-1682679 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1682 061-1682 679 bp Feature: domain Description: GIIM Note: maturase Location: 1682733-1682952 bp Feature: domain Description: GIIM Note: maturase Location: 1682 733-1682 952 bp Feature: gene Location: 1683590-1684684 bp Ori: AEB76263.1 Gene: murG Feature: domain Description: PRK12446 Location: 1683620-1684664 bp Feature: domain Description: PRK12 446 Location: 168362 0-1684664 bp Feature: gene Location: 1684927-1685121 bp Ori: AEB76264.1 Feature: domain Description: SASP Location: 1684942-1685113 bp Feature: domain Description: SASP Location: 1684942 -1685113 bp Feature: gene Location: 2204702-2204815 bp Feature: gene Location: 2204871-2205839 bp Feature: gene Location: 2206065-2207522 bp Ori: AEB76712.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2206458-2207076 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 06458-2 2 07076 bp Feature: domain Description: GIIM Note: maturase Location: 2207130-2207349 bp Feature: domain Description: GIIM Note: maturase Location: 2 2 07130-2 2 07349 bp Feature: gene Location: 2207745-2208497 bp Ori: AEB76713.1 Feature: domain Description: PRK09183 Location: 2207751-2208483 bp Feature: domain Description: PRK09183 Location: 2 2 07751-2 2 08483 bp Feature: gene Location: 2208500-2209786 bp Ori: AEB76714.1 Feature: domain Description: HTH_3 Location: 2208596-2208683 bp Feature: domain Description: HTH_3 Location: 2 2 08596-2 2 08683 bp Feature: domain Description: COG4584 Location: 2208914-2209304 bp Feature: domain Description: COG4584 Location: 2 2 08914-2 2 09304 bp Feature: gene Location: 2565637-2566713 bp Ori: AEB77035.1 Feature: domain Description: COG3581 Location: 2565655-2566693 bp Feature: domain Description: COG3581 Location: 2 565655-2 566693 bp Feature: gene Location: 2566706-2567560 bp Ori: AEB77036.1 Feature: domain Description: COG3580 Location: 2566712-2567540 bp Feature: domain Description: COG3580 Location: 2 566712 -2 567540 bp Feature: gene Location: 2567779-2569236 bp Ori: AEB77037.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2568172-2568790 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 568172 -2 568790 bp Feature: domain Description: GIIM Note: maturase Location: 2568844-2569063 bp Feature: domain Description: GIIM Note: maturase Location: 2 568844-2 569063 bp Feature: gene Location: 2569686-2570534 bp Ori: AEB77038.1 Feature: domain Description: RhaT Location: 2569692-2570517 bp Feature: domain Description: RhaT Location: 2 569692 -2 570517 bp Feature: gene Location: 2570682-2571233 bp Ori: AEB77039.1 Feature: domain Description: NapH Location: 2570709-2571228 bp Feature: domain Description: NapH Location: 2 570709-2 5712 2 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09183 (transposase/IS protein; Provisional), HTH_3 (pfam01381), COG4584 (Transposase ), RVT-GII, GIIM (pfam08388), P_permease (cd01116), spore_V_AC (TIGR02838), SpoVAD (pfam07451), Uup (COG0488), PerM (COG0628)
TIGR03987 (TIGR03987 family protein), FeoA (smart00899), PRK03902 (transcriptional regulator MntR), PRK12446 (undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed), SASP (pfam00269), COG3581 (Predicted nucleotide-binding protein, sugar kinase/HSP70/actin superfamily ), COG3580 (Predicted nucleotide-binding protein, sugar kinase/HSP70/actin superfamily ), RhaT (TIGR00776), NapH (COG0348)

Seq: CP002411.1 Clostridium botulinum BKT015925 plasmid p1BKT015925, complete sequence (203287 bp)
Overview 1 RT 1: 52338-57411 bp Neighborhood of RT #1 [52338, 57425] RVT-GII Intron_maturas2 HTH_3 COG4584 PRK09183 Feature: gene Location: 52338-52904 bp Feature: gene Location: 53265-53387 bp Feature: gene Location: 53652-55328 bp Ori: AEB77260.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53952-54687 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53 952-54687 bp Feature: domain Description: Intron_maturas2 Location: 54792-54954 bp Feature: domain Description: Intron_maturas2 Location: 54792-54954 bp Feature: gene Location: 55386-56606 bp Ori: AEB77261.1 Feature: domain Description: HTH_3 Location: 55482-55569 bp Feature: domain Description: HTH_3 Location: 55482-55569 bp Feature: domain Description: COG4584 Location: 55800-56190 bp Feature: domain Description: COG4584 Location: 55800-56190 bp Feature: gene Location: 56730-57425 bp Ori: AEB77262.1 Feature: domain Description: PRK09183 Location: 56739-57411 bp Feature: domain Description: PRK09183 Location: 5673 9-57411 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HTH_3 (pfam01381), COG4584 (Transposase ), PRK09183 (transposase/IS protein; Provisional)