myRT

myRT report for GCA_000212355.1_ASM21235v1

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Seq: CP002528.1 Dokdonia sp. 4H-3-7-5 chromosome, complete genome (3389993 bp)
Overview 1 RT 1: 143336-148265 bp 2 RT 2: 2533460-2540390 bp 3 RT 3: 2546129-2549989 bp 4 RT 4: 3266148-3270130 bp Neighborhood of RT #1 [143336, 148265] SUKH_6 RVT-GII GIIM Neighborhood of RT #2 [2533460, 2540390] YbbA TPR RVT-GII GIIM Neighborhood of RT #3 [2546129, 2549989] RVT-GII GIIM Neighborhood of RT #4 [3266148, 3270147] RVT-Retrons DUF4369 TlpA_like_family HigB_toxin Feature: gene Location: 143336-144448 bp Ori: AEE18111.1 Feature: domain Description: SUKH_6 Location: 143384-143780 bp Feature: domain Description: SUKH_6 Location: 1 43384-1 43780 bp Feature: gene Location: 144551-145768 bp Ori: AEE18112.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 144695-145310 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 44695-1 4531 0 bp Feature: domain Description: GIIM Note: maturase Location: 145385-145595 bp Feature: domain Description: GIIM Note: maturase Location: 1 45385-1 45595 bp Feature: gene Location: 146487-146873 bp Feature: gene Location: 147651-148265 bp Feature: gene Location: 2533460-2534086 bp Feature: gene Location: 2534819-2536075 bp Ori: AEE20228.1 Feature: domain Description: YbbA Location: 2534939-2535542 bp Feature: domain Description: YbbA Location: 2534939-2535542 bp Feature: domain Description: TPR Location: 2535839-2536019 bp Feature: domain Description: TPR Location: 2535839-253601 9 bp Feature: gene Location: 2537346-2538614 bp Ori: AEE20229.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2537541-2538156 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2537541 -25381 56 bp Feature: domain Description: GIIM Note: maturase Location: 2538231-2538441 bp Feature: domain Description: GIIM Note: maturase Location: 2538231 -2538441 bp Feature: gene Location: 2538723-2539280 bp Feature: gene Location: 2540019-2540390 bp Feature: gene Location: 2546129-2546611 bp Feature: gene Location: 2547240-2548508 bp Ori: AEE20235.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2547435-2548050 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2547435-2548050 bp Feature: domain Description: GIIM Note: maturase Location: 2548125-2548335 bp Feature: domain Description: GIIM Note: maturase Location: 25481 25-2548335 bp Feature: gene Location: 2548609-2549235 bp Feature: gene Location: 2549411-2549989 bp Feature: gene Location: 3266148-3267011 bp Feature: gene Location: 3267014-3267358 bp Feature: gene Location: 3267584-3268603 bp Ori: AEE20863.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3267809-3268358 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3267809-3268358 bp Feature: gene Location: 3268701-3269738 bp Ori: AEE20864.1 Feature: domain Description: DUF4369 Location: 3268788-3269076 bp Feature: domain Description: DUF4369 Location: 3268788-3269076 bp Feature: domain Description: TlpA_like_family Location: 3269334-3269685 bp Feature: domain Description: TlpA_like_family Location: 3269334-3269685 bp Feature: gene Location: 3269854-3270147 bp Ori: AEE20865.1 Feature: domain Description: HigB_toxin Location: 3269917-3270130 bp Feature: domain Description: HigB_toxin Location: 326991 7-32701 30 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SUKH_6 (pfam14568), RVT-GII, GIIM (pfam08388), YbbA (COG4181), TPR (smart00028), RVT-Retrons, DUF4369 (pfam14289), TlpA_like_family (cd02966), HigB_toxin (pfam09907)