myRT

myRT report for GCA_000221045.1_ASM22104v1

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Seq: CP002745.1 Collimonas fungivorans Ter331, complete genome (5186898 bp)
Overview 1 RT 1: 16490-19725 bp 2 RT 2: 2684885-2688752 bp 3 RT 3: 3065111-3071296 bp 4 RT 4: 3947025-3953066 bp Neighborhood of RT #1 [16490, 19727] RVT-UG28 Toxin_YhaV PRK09974 Neighborhood of RT #2 [2684885, 2688790] ribA RT_Bac_retron_II RVT-Retrons PqiA PqiA Neighborhood of RT #3 [3065111, 3071296] PhyH HTH_23 RVT-Retrons INT_Rci_Hp1_C Neighborhood of RT #4 [3947025, 3953066] DUF1566 Avd_like RVT-DGRs Dcm Dcm Dcm Feature: gene Location: 16490-17983 bp Ori: AEK59847.1 Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 16775-17411 bp Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 1 6775-1 741 1 bp Feature: gene Location: 18874-19389 bp Ori: AEK59848.1 Gene: yhaV Feature: domain Description: Toxin_YhaV Location: 18922-19330 bp Feature: domain Description: Toxin_YhaV Location: 1 8922-1 9330 bp Feature: gene Location: 19386-19727 bp Ori: AEK59849.1 Gene: prlF Feature: domain Description: PRK09974 Location: 19398-19725 bp Feature: domain Description: PRK09974 Location: 1 9398-1 9725 bp Feature: gene Location: 2684885-2685679 bp Ori: AEK62085.1 Gene: ribA Feature: domain Description: ribA Location: 2685059-2685635 bp Feature: domain Description: ribA Location: 2685059-2685635 bp Feature: gene Location: 2685789-2686124 bp Ori: AEK62086.1 Feature: domain Description: RT_Bac_retron_II Location: 2685798-2685963 bp Feature: domain Description: RT_Bac_retron_II Location: 2685798-2685963 bp Feature: gene Location: 2686146-2687150 bp Ori: AEK62087.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2686638-2687148 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2686638-26871 48 bp Feature: gene Location: 2687454-2688089 bp Ori: AEK62088.1 Gene: pqiA Feature: domain Description: PqiA Location: 2687592-2688045 bp Feature: domain Description: PqiA Location: 2687592-2688045 bp Feature: gene Location: 2688086-2688790 bp Ori: AEK62089.1 Gene: pqiA2 Feature: domain Description: PqiA Location: 2688149-2688752 bp Feature: domain Description: PqiA Location: 26881 49-2688752 bp Feature: gene Location: 3065111-3066304 bp Ori: AEK62410.1 Gene: phyH Feature: domain Description: PhyH Location: 3065345-3066227 bp Feature: domain Description: PhyH Location: 3065345-3066227 bp Feature: gene Location: 3067684-3068097 bp Ori: AEK62411.1 Feature: domain Description: HTH_23 Location: 3067729-3067804 bp Feature: domain Description: HTH_23 Location: 3067729-3067804 bp Feature: gene Location: 3068580-3069758 bp Ori: AEK62412.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3068709-3069282 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3068709-3069282 bp Feature: gene Location: 3070562-3071161 bp Ori: AEK62413.1 Gene: rci Feature: domain Description: INT_Rci_Hp1_C Location: 3070622-3071126 bp Feature: domain Description: INT_Rci_Hp1 _C Location: 3070622-3071 1 26 bp Feature: gene Location: 3071192-3071296 bp Feature: gene Location: 3947025-3947543 bp Ori: AEK63199.1 Feature: domain Description: DUF1566 Location: 3947277-3947523 bp Feature: domain Description: DUF1 566 Location: 3947277-3947523 bp Feature: gene Location: 3948031-3948426 bp Ori: AEK63200.1 Feature: domain Description: Avd_like Location: 3948058-3948364 bp Feature: domain Description: Avd_like Location: 3948058-3948364 bp Feature: gene Location: 3948405-3949796 bp Ori: AEK63201.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3948882-3949569 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3948882-3949569 bp Feature: gene Location: 3949793-3951904 bp Ori: AEK63202.1 Feature: domain Description: Dcm Location: 3949844-3950279 bp Feature: domain Description: Dcm Location: 3949844-3950279 bp Feature: domain Description: Dcm Location: 3950366-3950678 bp Feature: domain Description: Dcm Location: 3950366-3950678 bp Feature: domain Description: Dcm Location: 3951683-3951863 bp Feature: domain Description: Dcm Location: 3951 683-3951 863 bp Feature: gene Location: 3952008-3953066 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG28, Toxin_YhaV (pfam11663), PRK09974 (type II toxin-antitoxin system PrlF family antitoxin), ribA (TIGR00505), RT_Bac_retron_II (cd03487), RVT-Retrons, PqiA (pfam04403), PhyH (pfam05721), HTH_23 (pfam13384), INT_Rci_Hp1_C (cd00796)
DUF1566 (pfam07603), Avd_like (cd16376), RVT-DGRs, Dcm (COG0270)