myRT

myRT report for GCA_000225345.1_ASM22534v1

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Seq: CP003040.1 Roseburia hominis A2-183, complete genome (3592125 bp)
Overview 1 RT 1: 522004-528717 bp 2 RT 2: 3280445-3293095 bp Neighborhood of RT #1 [522004, 528734] FadH2 LhgO RVT-GII GIIM Type2_restr_D3 WYL DUF45 DUF45 Neighborhood of RT #2 [3280445, 3293095] DUF1016_N YhcG_C RVT_N RVT-GII GIIM DUF3849 YtxK COG4646 Feature: gene Location: 522004-523293 bp Ori: AEN95606.1 Feature: domain Description: FadH2 Location: 522016-522967 bp Feature: domain Description: FadH2 Location: 52201 6-522967 bp Feature: gene Location: 523308-524759 bp Ori: AEN95607.1 Feature: domain Description: LhgO Location: 523311-524553 bp Feature: domain Description: LhgO Location: 52331 1 -524553 bp Feature: gene Location: 525672-526955 bp Ori: AEN95608.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 525882-526497 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 525882-526497 bp Feature: domain Description: GIIM Note: maturase Location: 526557-526782 bp Feature: domain Description: GIIM Note: maturase Location: 526557-526782 bp Feature: gene Location: 527158-528162 bp Ori: AEN95609.1 Feature: domain Description: Type2_restr_D3 Location: 527236-527356 bp Feature: domain Description: Type2_restr_D3 Location: 527236-527356 bp Feature: domain Description: WYL Location: 527590-528136 bp Feature: domain Description: WYL Location: 527590-5281 36 bp Feature: gene Location: 528159-528734 bp Ori: AEN95610.1 Feature: domain Description: DUF45 Location: 528228-528396 bp Feature: domain Description: DUF45 Location: 528228-528396 bp Feature: domain Description: DUF45 Location: 528426-528717 bp Feature: domain Description: DUF45 Location: 528426-52871 7 bp Feature: gene Location: 3280445-3281473 bp Ori: AEN98176.1 Feature: domain Description: DUF1016_N Location: 3280493-3280895 bp Feature: domain Description: DUF1 01 6_N Location: 3280493-3280895 bp Feature: domain Description: YhcG_C Location: 3280970-3281426 bp Feature: domain Description: YhcG_C Location: 3280970-3281 426 bp Feature: gene Location: 3281640-3282635 bp Feature: gene Location: 3282756-3284426 bp Ori: AEN98178.1 Feature: domain Description: RVT_N Location: 3282801-3283044 bp Feature: domain Description: RVT_N Location: 3282801 -3283044 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3283089-3283737 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3283089-3283737 bp Feature: domain Description: GIIM Note: maturase Location: 3283791-3284022 bp Feature: domain Description: GIIM Note: maturase Location: 3283791 -3284022 bp Feature: gene Location: 3285005-3292690 bp Ori: AEN98179.1 Feature: domain Description: DUF3849 Location: 3287843-3288188 bp Feature: domain Description: DUF3849 Location: 3287843-32881 88 bp Feature: domain Description: YtxK Location: 3288836-3289565 bp Feature: domain Description: YtxK Location: 3288836-3289565 bp Feature: domain Description: COG4646 Location: 3289637-3292193 bp Feature: domain Description: COG4646 Location: 3289637-32921 93 bp Feature: gene Location: 3292733-3293095 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FadH2 (COG0446), LhgO (COG0579), RVT-GII, GIIM (pfam08388), Type2_restr_D3 (pfam16902), WYL (pfam13280), DUF45 (pfam01863), DUF1016_N (pfam17761), YhcG_C, RVT_N (pfam13655)
DUF3849 (pfam12960), YtxK (COG0827), COG4646 (Adenine-specific DNA methylase, N12 class )