myRT

myRT report for GCA_000227685.3_ASM22768v3

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Seq: CP007029.1 Thioalkalivibrio paradoxus ARh 1, complete genome (3756729 bp)
Overview 1 RT 1: 708833-712115 bp 2 RT 2: 842968-847698 bp 3 RT 3: 960889-967351 bp 4 RT 4: 2894888-2899487 bp Neighborhood of RT #1 [708833, 712144] VapB_antitoxin VapC RVT-GII GIIM PRiA4_ORF3 Unstab_antitox Neighborhood of RT #2 [842968, 847721] MauG GlcD RVT-GII GIIM Tra5 BBE Neighborhood of RT #3 [960889, 967386] RVT-GII GIIM RVT-GII GIIM LZ_Tnp_IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C TnpB_IS66 Neighborhood of RT #4 [2894888, 2899633] PIN_VapC-like AbrB RVT-GII GIIM ADP_ribosyl_GH Feature: gene Location: 708833-709030 bp Ori: AHE97461.1 Feature: domain Description: VapB_antitoxin Location: 708836-708971 bp Feature: domain Description: VapB_antitoxin Location: 708836-708971 bp Feature: gene Location: 709027-709395 bp Ori: AHE97462.1 Feature: domain Description: VapC Location: 709030-709363 bp Feature: domain Description: VapC Location: 709030-709363 bp Feature: gene Location: 709979-711241 bp Ori: AHE97463.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 710183-710840 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71 01 83-71 0840 bp Feature: domain Description: GIIM Note: maturase Location: 710921-711143 bp Feature: domain Description: GIIM Note: maturase Location: 71 0921 -71 1 1 43 bp Feature: gene Location: 711408-711776 bp Ori: AHE97464.1 Feature: domain Description: PRiA4_ORF3 Location: 711435-711717 bp Feature: domain Description: PRiA4_ORF3 Location: 71 1 435-71 1 71 7 bp Feature: gene Location: 711917-712144 bp Ori: AHE97465.1 Feature: domain Description: Unstab_antitox Location: 711962-712115 bp Feature: domain Description: Unstab_antitox Location: 71 1 962-71 21 1 5 bp Feature: gene Location: 842968-843237 bp Ori: AHE99923.1 Feature: domain Description: MauG Location: 842989-843214 bp Feature: domain Description: MauG Location: 842989-84321 4 bp Feature: gene Location: 843250-844149 bp Ori: AHE97559.1 Feature: domain Description: GlcD Location: 843253-843547 bp Feature: domain Description: GlcD Location: 843253-843547 bp Feature: gene Location: 844463-845725 bp Ori: AHE97560.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 844667-845324 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 844667-845324 bp Feature: domain Description: GIIM Note: maturase Location: 845405-845627 bp Feature: domain Description: GIIM Note: maturase Location: 845405-845627 bp Feature: gene Location: 846338-847414 bp Ori: AHE97561.1 Feature: domain Description: Tra5 Location: 846407-847244 bp Feature: domain Description: Tra5 Location: 846407-847244 bp Feature: gene Location: 847602-847721 bp Ori: AHE99924.1 Feature: domain Description: BBE Location: 847629-847698 bp Feature: domain Description: BBE Location: 847629-847698 bp Feature: gene Location: 960889-961233 bp Feature: gene Location: 961391-961951 bp Feature: gene Location: 962069-962761 bp Ori: AHE97660.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 962084-962324 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 962084-962324 bp Feature: domain Description: GIIM Note: maturase Location: 962369-962570 bp Feature: domain Description: GIIM Note: maturase Location: 962369-962570 bp Feature: gene Location: 962670-963395 bp Ori: AHE97661.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 962736-963021 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 962736-963021 bp Feature: domain Description: GIIM Note: maturase Location: 963093-963297 bp Feature: domain Description: GIIM Note: maturase Location: 963093-963297 bp Feature: gene Location: 965308-966984 bp Ori: AHE97662.1 Feature: domain Description: LZ_Tnp_IS66 Location: 965491-965716 bp Feature: domain Description: LZ_Tnp_IS66 Location: 965491 -96571 6 bp Feature: domain Description: DDE_Tnp_IS66 Location: 965935-966808 bp Feature: domain Description: DDE_Tnp_IS66 Location: 965935-966808 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 966826-966940 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 966826-966940 bp Feature: gene Location: 967033-967386 bp Ori: AHE97663.1 Feature: domain Description: TnpB_IS66 Location: 967060-967351 bp Feature: domain Description: TnpB_IS66 Location: 967060-967351 bp Feature: gene Location: 2894888-2895268 bp Ori: AHE99083.1 Feature: domain Description: PIN_VapC-like Location: 2894897-2895245 bp Feature: domain Description: PIN_VapC-like Location: 2894897-2895245 bp Feature: gene Location: 2895265-2895534 bp Ori: AHE99084.1 Feature: domain Description: AbrB Location: 2895292-2895508 bp Feature: domain Description: AbrB Location: 2895292-2895508 bp Feature: gene Location: 2896106-2897368 bp Ori: AHE99085.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2896310-2896967 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 289631 0-2896967 bp Feature: domain Description: GIIM Note: maturase Location: 2897048-2897270 bp Feature: domain Description: GIIM Note: maturase Location: 2897048-2897270 bp Feature: gene Location: 2898792-2898965 bp Feature: gene Location: 2899085-2899633 bp Ori: AHE99086.1 Feature: domain Description: ADP_ribosyl_GH Location: 2899118-2899487 bp Feature: domain Description: ADP_ribosyl_GH Location: 28991 1 8-2899487 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VapB_antitoxin (pfam09957), VapC (COG1487), RVT-GII, GIIM (pfam08388), PRiA4_ORF3 (pfam07929), Unstab_antitox (pfam09720), MauG (COG1858), GlcD (COG0277), Tra5 (COG2801), BBE (pfam08031)
LZ_Tnp_IS66 (pfam13007), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), TnpB_IS66 (pfam05717), PIN_VapC-like (cd18715), AbrB (pfam05145), ADP_ribosyl_GH (pfam03747)