myRT

myRT report for GCA_000230695.3_ASM23069v3

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Seq: CP003470.1 Rhodanobacter denitrificans strain 2APBS1, complete genome (4225490 bp)
Overview 1 RT 1: 3494128-3501563 bp Neighborhood of RT #1 [3494128, 3501568] PRK10446 COG4067 RVT_N RVT-GII GIIM HNHc FecR TrmB Feature: gene Location: 3494128-3495048 bp Ori: AGG90374.1 Feature: domain Description: PRK10446 Location: 3494131-3495004 bp Feature: domain Description: PRK1 0446 Location: 34941 31 -3495004 bp Feature: gene Location: 3495059-3495511 bp Ori: AGG90375.1 Feature: domain Description: COG4067 Location: 3495071-3495479 bp Feature: domain Description: COG4067 Location: 3495071 -3495479 bp Feature: gene Location: 3495696-3497321 bp Ori: AGG90376.1 Feature: domain Description: RVT_N Location: 3495747-3495990 bp Feature: domain Description: RVT_N Location: 3495747-3495990 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3496035-3496659 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3496035-3496659 bp Feature: domain Description: GIIM Note: maturase Location: 3496716-3496944 bp Feature: domain Description: GIIM Note: maturase Location: 349671 6-3496944 bp Feature: domain Description: HNHc Note: nucleases Location: 3497145-3497301 bp Feature: domain Description: HNHc Note: nucleases Location: 34971 45-3497301 bp Feature: gene Location: 3498513-3500759 bp Ori: AGG90377.1 Feature: domain Description: FecR Location: 3498558-3499122 bp Feature: domain Description: FecR Location: 3498558-34991 22 bp Feature: gene Location: 3500867-3501568 bp Ori: AGG90378.1 Feature: domain Description: TrmB Location: 3500903-3501563 bp Feature: domain Description: TrmB Location: 3500903-3501 563 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10446 (30S ribosomal protein S6--L-glutamate ligase), COG4067 (Uncharacterized conserved protein ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), FecR (pfam04773), TrmB (pfam01978)