myRT

myRT report for GCA_000231405.3_ASM23140v3

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Seq: CP007032.1 Desulfitobacterium metallireducens DSM 15288, complete genome (3176073 bp)
Overview 1 RT 1: 593050-606308 bp 2 RT 2: 1390251-1394842 bp 3 RT 3: 1722484-1726333 bp 4 RT 4: 1918932-1923226 bp Neighborhood of RT #1 [593050, 606308] ATPgrasp_YheCD ATPgrasp_YheCD Glu_2_3_NH3_mut RVT-GII GIIM CARDB B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat DUF3794 Neighborhood of RT #2 [1390251, 1394859] PRK05809 YgaE RVT-GII GIIM YsdA YurZ Neighborhood of RT #3 [1722484, 1726333] DR1245-like SASP RVT-GII GIIM Neighborhood of RT #4 [1918932, 1923300] ImmA HTH_XRE RVT-GII GIIM RNA_pol_A_CTD DUF1659 Feature: gene Location: 593050-595785 bp Ori: CP007032.1_593050_595785_- Feature: domain Description: ATPgrasp_YheCD Location: 593620-594346 bp Feature: domain Description: ATPgrasp_YheCD Location: 593620-594346 bp Feature: domain Description: ATPgrasp_YheCD Location: 595018-595750 bp Feature: domain Description: ATPgrasp_YheCD Location: 59501 8-595750 bp Feature: gene Location: 595846-597060 bp Ori: CP007032.1_595846_597060_- Feature: domain Description: Glu_2_3_NH3_mut Location: 595855-597052 bp Feature: domain Description: Glu_2_3_NH3_mut Location: 595855-597052 bp Feature: gene Location: 597631-599040 bp Ori: CP007032.1_597631_599040_+ Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 597985-598603 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 597985-598603 bp Feature: domain Description: GIIM Note: maturase Location: 598654-598888 bp Feature: domain Description: GIIM Note: maturase Location: 598654-598888 bp Feature: gene Location: 599135-605788 bp Ori: CP007032.1_599135_605788_- Feature: domain Description: CARDB Location: 600254-600575 bp Feature: domain Description: CARDB Location: 600254-600575 bp Feature: domain Description: B_ant_repeat Location: 600632-600779 bp Feature: domain Description: B_ant_repeat Location: 600632-600779 bp Feature: domain Description: B_ant_repeat Location: 601046-601202 bp Feature: domain Description: B_ant_repeat Location: 601 046-601 202 bp Feature: domain Description: B_ant_repeat Location: 601460-601613 bp Feature: domain Description: B_ant_repeat Location: 601 460-601 61 3 bp Feature: domain Description: B_ant_repeat Location: 601853-602006 bp Feature: domain Description: B_ant_repeat Location: 601 853-602006 bp Feature: domain Description: B_ant_repeat Location: 602243-602399 bp Feature: domain Description: B_ant_repeat Location: 602243-602399 bp Feature: domain Description: B_ant_repeat Location: 602633-602789 bp Feature: domain Description: B_ant_repeat Location: 602633-602789 bp Feature: domain Description: B_ant_repeat Location: 603023-603176 bp Feature: domain Description: B_ant_repeat Location: 603023-6031 76 bp Feature: domain Description: B_ant_repeat Location: 603416-603572 bp Feature: domain Description: B_ant_repeat Location: 60341 6-603572 bp Feature: domain Description: B_ant_repeat Location: 603809-603965 bp Feature: domain Description: B_ant_repeat Location: 603809-603965 bp Feature: domain Description: B_ant_repeat Location: 604205-604361 bp Feature: domain Description: B_ant_repeat Location: 604205-604361 bp Feature: domain Description: B_ant_repeat Location: 604601-604757 bp Feature: domain Description: B_ant_repeat Location: 604601 -604757 bp Feature: domain Description: B_ant_repeat Location: 604997-605153 bp Feature: domain Description: B_ant_repeat Location: 604997-6051 53 bp Feature: domain Description: DUF3794 Location: 605432-605708 bp Feature: domain Description: DUF3794 Location: 605432-605708 bp Feature: gene Location: 605820-606308 bp Feature: gene Location: 1390251-1391033 bp Ori: CP007032.1_1390251_1391033_+ Feature: domain Description: PRK05809 Location: 1390254-1391031 bp Feature: domain Description: PRK05809 Location: 1 390254-1 391 031 bp Feature: gene Location: 1391245-1392312 bp Ori: CP007032.1_1391245_1392312_+ Feature: domain Description: YgaE Location: 1391254-1391785 bp Feature: domain Description: YgaE Location: 1 391 254-1 391 785 bp Feature: gene Location: 1392775-1394178 bp Ori: CP007032.1_1392775_1394178_+ Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1393129-1393747 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3931 29-1 393747 bp Feature: domain Description: GIIM Note: maturase Location: 1393798-1394032 bp Feature: domain Description: GIIM Note: maturase Location: 1 393798-1 394032 bp Feature: gene Location: 1394284-1394553 bp Ori: CP007032.1_1394284_1394553_- Feature: domain Description: YsdA Location: 1394296-1394530 bp Feature: domain Description: YsdA Location: 1 394296-1 394530 bp Feature: gene Location: 1394557-1394859 bp Ori: CP007032.1_1394557_1394859_- Feature: domain Description: YurZ Location: 1394581-1394842 bp Feature: domain Description: YurZ Location: 1 394581 -1 394842 bp Feature: gene Location: 1722484-1722942 bp Ori: CP007032.1_1722484_1722942_+ Feature: domain Description: DR1245-like Location: 1722499-1722874 bp Feature: domain Description: DR1 245-like Location: 1 722499-1 722874 bp Feature: gene Location: 1723073-1723279 bp Ori: CP007032.1_1723073_1723279_+ Feature: domain Description: SASP Location: 1723097-1723259 bp Feature: domain Description: SASP Location: 1 723097-1 723259 bp Feature: gene Location: 1723386-1724795 bp Ori: CP007032.1_1723386_1724795_- Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1723740-1724358 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 723740-1 724358 bp Feature: domain Description: GIIM Note: maturase Location: 1724409-1724643 bp Feature: domain Description: GIIM Note: maturase Location: 1 724409-1 724643 bp Feature: gene Location: 1725324-1725524 bp Feature: gene Location: 1725593-1726333 bp Feature: gene Location: 1918932-1919726 bp Ori: CP007032.1_1918932_1919726_- Feature: domain Description: ImmA Location: 1919025-1919478 bp Feature: domain Description: ImmA Location: 1 91 9025-1 91 9478 bp Feature: gene Location: 1919719-1920069 bp Ori: CP007032.1_1919719_1920069_- Feature: domain Description: HTH_XRE Location: 1919737-1919908 bp Feature: domain Description: HTH_XRE Location: 1 91 9737-1 91 9908 bp Feature: gene Location: 1920520-1921923 bp Ori: CP007032.1_1920520_1921923_- Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1920874-1921492 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 920874-1 921 492 bp Feature: domain Description: GIIM Note: maturase Location: 1921543-1921777 bp Feature: domain Description: GIIM Note: maturase Location: 1 921 543-1 921 777 bp Feature: gene Location: 1922397-1922738 bp Ori: CP007032.1_1922397_1922738_- Feature: domain Description: RNA_pol_A_CTD Location: 1922565-1922721 bp Feature: domain Description: RNA_pol_A_CTD Location: 1 922565-1 922721 bp Feature: gene Location: 1923073-1923300 bp Ori: CP007032.1_1923073_1923300_+ Feature: domain Description: DUF1659 Location: 1923094-1923226 bp Feature: domain Description: DUF1 659 Location: 1 923094-1 923226 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ATPgrasp_YheCD (pfam14398), Glu_2_3_NH3_mut (TIGR04368), RVT-GII, GIIM (pfam08388), CARDB (pfam07705), B_ant_repeat (TIGR01451), DUF3794 (pfam12673), PRK05809 (short-chain-enoyl-CoA hydratase), YgaE (COG4129), YsdA (COG3326)
YurZ (COG0599), DR1245-like (cd17033), SASP (pfam00269), ImmA (COG2856), HTH_XRE (smart00530), RNA_pol_A_CTD (pfam03118), DUF1659 (pfam07872)