myRT

myRT report for GCA_000237325.1_ASM23732v1

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Seq: HE577055.1 Paenibacillus polymyxa M1 plasmid pPPM1a, complete replicon (366576 bp)
Overview 1 RT 1: 255672-262327 bp Neighborhood of RT #1 [255672, 262327] RVT-GII group_II_RT_mat HNHc Dcm Feature: gene Location: 255672-256109 bp Feature: gene Location: 256446-257006 bp Feature: gene Location: 258145-260067 bp Ori: CCC86350.1 Gene: matK Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 258445-259141 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 258445-2591 41 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 259267-259492 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 259267-259492 bp Feature: domain Description: HNHc Note: nucleases Location: 259789-259933 bp Feature: domain Description: HNHc Note: nucleases Location: 259789-259933 bp Feature: gene Location: 260209-261522 bp Ori: CCC86351.1 Gene: scrFIA Feature: domain Description: Dcm Location: 260539-261475 bp Feature: domain Description: Dcm Location: 260539-261 475 bp Feature: gene Location: 261740-262327 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, group_II_RT_mat (TIGR04416), HNHc (smart00507), Dcm (COG0270)

Seq: HE577054.1 Paenibacillus polymyxa M1 main chromosome, complete genome (5864546 bp)
Overview 1 RT 1: 3088312-3096407 bp Neighborhood of RT #1 [3088312, 3096407] CpaF CpaF RVT-AbiA PHA02517 Feature: gene Location: 3088312-3090396 bp Feature: gene Location: 3090386-3091612 bp Ori: CCC85552.1 Gene: tadA Feature: domain Description: CpaF Location: 3090584-3090989 bp Feature: domain Description: CpaF Location: 3090584-3090989 bp Feature: domain Description: CpaF Location: 3091220-3091400 bp Feature: domain Description: CpaF Location: 30912 2 0-3091400 bp Feature: gene Location: 3092043-3094040 bp Ori: CCC85553.1 Gene: M1_2937 Feature: RT Description: RVT-AbiA Note: AbiA RT Location: 3092460-3092976 bp Feature: RT Description: RVT-AbiA Note: AbiA RT Location: 3092 460-3092 976 bp Feature: gene Location: 3094683-3096020 bp Ori: CCC85554.1 Gene: iS1354 Feature: domain Description: PHA02517 Location: 3095208-3095997 bp Feature: domain Description: PHA02 517 Location: 30952 08-3095997 bp Feature: gene Location: 3096219-3096407 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CpaF (COG4962), RVT-AbiA, PHA02517 (putative transposase OrfB; Reviewed)