myRT

myRT report for GCA_000242595.3_ASM24259v3

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Seq: CP003282.1 Spirochaeta africana DSM 8902, complete genome (3285855 bp)
Overview 1 RT 1: 1159873-1165282 bp 2 RT 2: 1168121-1176166 bp Neighborhood of RT #1 [1159873, 1165350] COG2402 RHH_1 RVT-GII GIIM SIR2_2 Transposase_mut Neighborhood of RT #2 [1168121, 1176249] COG5304 Transposase_mut RVT-UG8 RVT-UG3 Transposase_mut Feature: gene Location: 1159873-1160289 bp Ori: AFG37092.1 Feature: domain Description: COG2402 Location: 1159888-1160242 bp Feature: domain Description: COG2402 Location: 1 1 59888-1 1 60242 bp Feature: gene Location: 1160267-1160518 bp Ori: AFG37093.1 Feature: domain Description: RHH_1 Location: 1160273-1160384 bp Feature: domain Description: RHH_1 Location: 1 1 60273-1 1 60384 bp Feature: gene Location: 1161306-1162589 bp Ori: AFG37094.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1161528-1162152 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 61 528-1 1 621 52 bp Feature: domain Description: GIIM Note: maturase Location: 1162194-1162398 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 621 94-1 1 62398 bp Feature: gene Location: 1162693-1163988 bp Ori: AFG37095.1 Feature: domain Description: SIR2_2 Location: 1163233-1163704 bp Feature: domain Description: SIR2_2 Location: 1 1 63233-1 1 63704 bp Feature: gene Location: 1164154-1165350 bp Ori: AFG37096.1 Feature: domain Description: Transposase_mut Location: 1164202-1165282 bp Feature: domain Description: Transposase_mut Location: 1 1 64202-1 1 65282 bp Feature: gene Location: 1168121-1168390 bp Ori: AFG37101.1 Feature: domain Description: COG5304 Location: 1168124-1168370 bp Feature: domain Description: COG5304 Location: 1 1 681 24-1 1 68370 bp Feature: gene Location: 1168659-1169855 bp Ori: AFG37102.1 Feature: domain Description: Transposase_mut Location: 1168707-1169787 bp Feature: domain Description: Transposase_mut Location: 1 1 68707-1 1 69787 bp Feature: gene Location: 1170484-1172610 bp Ori: AFG37103.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1171141-1171597 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1 1 71 1 41 -1 1 71 597 bp Feature: gene Location: 1172600-1173955 bp Ori: AFG37104.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1173047-1173527 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1 1 73047-1 1 73527 bp Feature: gene Location: 1174273-1174908 bp Feature: gene Location: 1175068-1176249 bp Ori: AFG37106.1 Feature: domain Description: Transposase_mut Location: 1175086-1176166 bp Feature: domain Description: Transposase_mut Location: 1 1 75086-1 1 761 66 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG2402 (Predicted nucleic acid-binding protein, contains PIN domain ), RHH_1 (pfam01402), RVT-GII, GIIM (pfam08388), SIR2_2 (pfam13289), Transposase_mut (pfam00872), COG5304 (Predicted DNA binding protein, CopG/RHH family ), RVT-UG8, RVT-UG3