myRT

myRT report for GCA_000243135.3_ASM24313v3

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Seq: CP003344.1 Desulfitobacterium dichloroeliminans LMG P-21439, complete genome (3624449 bp)
Overview 1 RT 1: 188175-194627 bp 2 RT 2: 2345816-2352233 bp 3 RT 3: 3021221-3028562 bp Neighborhood of RT #1 [188175, 194627] tatA RVT-GII GIIM MrcB Neighborhood of RT #2 [2345816, 2352265] R_switched_YjbE COG3894 RVT-GII GIIM Crp Neighborhood of RT #3 [3021221, 3028576] DPM1_like_bac PRK11706 RVT-GII GIIM selB SelB-wing_2 selB selA Feature: gene Location: 188175-188408 bp Ori: AGA67744.1 Feature: domain Description: tatA Location: 188202-188352 bp Feature: domain Description: tatA Location: 1 88202-1 88352 bp Feature: gene Location: 188964-189332 bp Feature: gene Location: 189779-191185 bp Ori: AGA67746.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 190133-190751 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 901 33-1 90751 bp Feature: domain Description: GIIM Note: maturase Location: 190802-191033 bp Feature: domain Description: GIIM Note: maturase Location: 1 90802-1 91 033 bp Feature: gene Location: 191309-193942 bp Ori: AGA67747.1 Feature: domain Description: MrcB Location: 191336-193556 bp Feature: domain Description: MrcB Location: 1 91 336-1 93556 bp Feature: gene Location: 194256-194627 bp Feature: gene Location: 2345816-2346505 bp Ori: AGA69722.1 Feature: domain Description: R_switched_YjbE Location: 2345849-2346365 bp Feature: domain Description: R_switched_YjbE Location: 2345849-2346365 bp Feature: gene Location: 2346645-2348477 bp Ori: AGA69723.1 Feature: domain Description: COG3894 Location: 2346648-2348466 bp Feature: domain Description: COG3894 Location: 2346648-2348466 bp Feature: gene Location: 2348704-2350131 bp Ori: AGA69724.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2349070-2349688 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2349070-2349688 bp Feature: domain Description: GIIM Note: maturase Location: 2349739-2349949 bp Feature: domain Description: GIIM Note: maturase Location: 2349739-2349949 bp Feature: gene Location: 2351090-2351437 bp Feature: gene Location: 2351582-2352265 bp Ori: AGA69726.1 Feature: domain Description: Crp Location: 2351612-2352233 bp Feature: domain Description: Crp Location: 2351 61 2-2352233 bp Feature: gene Location: 3021221-3021961 bp Ori: AGA70382.1 Feature: domain Description: DPM1_like_bac Location: 3021242-3021773 bp Feature: domain Description: DPM1 _like_bac Location: 3021 242-3021 773 bp Feature: gene Location: 3021963-3023105 bp Ori: AGA70383.1 Feature: domain Description: PRK11706 Location: 3021972-3023091 bp Feature: domain Description: PRK1 1 706 Location: 3021 972-3023091 bp Feature: gene Location: 3023300-3024706 bp Ori: AGA70384.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3023654-3024272 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3023654-3024272 bp Feature: domain Description: GIIM Note: maturase Location: 3024323-3024554 bp Feature: domain Description: GIIM Note: maturase Location: 3024323-3024554 bp Feature: gene Location: 3025240-3027144 bp Ori: AGA70385.1 Feature: domain Description: selB Location: 3025252-3026329 bp Feature: domain Description: selB Location: 3025252-3026329 bp Feature: domain Description: SelB-wing_2 Location: 3026581-3026740 bp Feature: domain Description: SelB-wing_2 Location: 3026581 -3026740 bp Feature: domain Description: selB Location: 3026902-3027115 bp Feature: domain Description: selB Location: 3026902-30271 1 5 bp Feature: gene Location: 3027149-3028576 bp Ori: AGA70386.1 Feature: domain Description: selA Location: 3027179-3028562 bp Feature: domain Description: selA Location: 30271 79-3028562 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT tatA (PRK14861), RVT-GII, GIIM (pfam08388), MrcB (COG0744), R_switched_YjbE (TIGR03717), COG3894 (Uncharacterized 2Fe-2 and 4Fe-4S clusters-containing protein, contains DUF4445 domain ), Crp (pfam00325), DPM1_like_bac (cd04187), PRK11706 (TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional), selB (TIGR00475)
SelB-wing_2 (pfam09106), selA (TIGR00474)