myRT

myRT report for GCA_000250945.1_ASM25094v1

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Seq: CP003351.1 Enterococcus faecium Aus0004, complete genome (2955294 bp)
Overview 1 RT 1: 1870626-1885399 bp 2 RT 2: 2795247-2800443 bp Neighborhood of RT #1 [1870626, 1885476] AAA_10 RVT-GII AAA_10 TcpE PHP_HisPPase SMC_prok_B SMC_prok_B ArdA RVT-GII HNHc DUF3789 Rep_trans Neighborhood of RT #2 [2795247, 2800514] HTH_XRE Rol_Rep_N Rep_trans DUF3789 RVT-GII HNHc ArdA TcpE Feature: gene Location: 1870626-1872755 bp Feature: gene Location: 1872760-1873680 bp Ori: AFC63934.1 Feature: domain Description: AAA_10 Location: 1872763-1873645 bp Feature: domain Description: AAA_1 0 Location: 1 872763-1 873645 bp Feature: gene Location: 1873814-1875640 bp Ori: AFC63935.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1874114-1874813 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 8741 1 4-1 87481 3 bp Feature: gene Location: 1876337-1877887 bp Ori: AFC63936.1 Feature: domain Description: AAA_10 Location: 1877666-1877849 bp Feature: domain Description: AAA_1 0 Location: 1 877666-1 877849 bp Feature: gene Location: 1877874-1878263 bp Ori: AFC63937.1 Feature: domain Description: TcpE Location: 1877892-1878192 bp Feature: domain Description: TcpE Location: 1 877892-1 8781 92 bp Feature: gene Location: 1879212-1881059 bp Ori: AFC63939.1 Feature: domain Description: PHP_HisPPase Location: 1879239-1879716 bp Feature: domain Description: PHP_HisPPase Location: 1 879239-1 87971 6 bp Feature: domain Description: SMC_prok_B Location: 1880118-1880217 bp Feature: domain Description: SMC_prok_B Location: 1 8801 1 8-1 88021 7 bp Feature: domain Description: SMC_prok_B Location: 1880547-1880982 bp Feature: domain Description: SMC_prok_B Location: 1 880547-1 880982 bp Feature: gene Location: 1881156-1881656 bp Ori: AFC63940.1 Feature: domain Description: ArdA Location: 1881174-1881645 bp Feature: domain Description: ArdA Location: 1 881 1 74-1 881 645 bp Feature: gene Location: 1881997-1883907 bp Ori: AFC63941.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1882330-1883068 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 882330-1 883068 bp Feature: domain Description: HNHc Note: nucleases Location: 1883623-1883788 bp Feature: domain Description: HNHc Note: nucleases Location: 1 883623-1 883788 bp Feature: gene Location: 1884653-1884790 bp Ori: AFC63942.1 Feature: domain Description: DUF3789 Location: 1884680-1884773 bp Feature: domain Description: DUF3789 Location: 1 884680-1 884773 bp Feature: gene Location: 1884787-1885476 bp Ori: AFC63943.1 Feature: domain Description: Rep_trans Location: 1884790-1885399 bp Feature: domain Description: Rep_trans Location: 1 884790-1 885399 bp Feature: gene Location: 2795247-2796431 bp Ori: AFC64816.1 Feature: domain Description: HTH_XRE Location: 2795277-2795421 bp Feature: domain Description: HTH_XRE Location: 2795277-2795421 bp Feature: domain Description: Rol_Rep_N Location: 2795454-2795718 bp Feature: domain Description: Rol_Rep_N Location: 2795454-279571 8 bp Feature: domain Description: Rep_trans Location: 2795742-2796354 bp Feature: domain Description: Rep_trans Location: 2795742-2796354 bp Feature: gene Location: 2796428-2796565 bp Ori: AFC64817.1 Feature: domain Description: DUF3789 Location: 2796455-2796548 bp Feature: domain Description: DUF3789 Location: 2796455-2796548 bp Feature: gene Location: 2797311-2799221 bp Ori: AFC64818.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2797644-2798382 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2797644-2798382 bp Feature: domain Description: HNHc Note: nucleases Location: 2798937-2799102 bp Feature: domain Description: HNHc Note: nucleases Location: 2798937-27991 02 bp Feature: gene Location: 2799562-2800065 bp Ori: AFC64819.1 Feature: domain Description: ArdA Location: 2799580-2800051 bp Feature: domain Description: ArdA Location: 2799580-2800051 bp Feature: gene Location: 2800125-2800514 bp Ori: AFC64820.1 Feature: domain Description: TcpE Location: 2800143-2800443 bp Feature: domain Description: TcpE Location: 28001 43-2800443 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_10 (pfam12846), RVT-GII, TcpE (pfam12648), PHP_HisPPase (cd07432), SMC_prok_B (TIGR02168), ArdA (pfam07275), HNHc (smart00507), DUF3789 (pfam12664), Rep_trans (pfam02486), HTH_XRE (smart00530)
Rol_Rep_N (pfam18106)