myRT

myRT report for GCA_000257275.1_ASM25727v1

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Seq: CP002291.1 Escherichia coli P12b, complete genome (4935294 bp)
Overview 1 RT 1: 323439-326516 bp 2 RT 2: 1142327-1148829 bp 3 RT 3: 1266939-1269798 bp 4 RT 4: 1273810-1279736 bp 5 RT 5: 1718824-1722852 bp 6 RT 6: 4141992-4146362 bp Neighborhood of RT #1 [323439, 326581] PHA02517 RVT-GII GIIM PHA02517 Neighborhood of RT #2 [1142327, 1148948] PHA02517 RVT-GII GIIM PHA02517 BID_1 BID_1 BID_1 BID_1 BID_1 BID_1 BID_1 BID_1 BID_1 BID_1 BID_1 Neighborhood of RT #3 [1266939, 1269806] PHA02517 RVT-GII GIIM PHA02517 Neighborhood of RT #4 [1273810, 1279738] DEXXQc_SF1 PHA02517 RVT-GII GIIM PHA02517 PRK10396 Neighborhood of RT #5 [1718824, 1722968] RVT-GII GIIM COG3547 Neighborhood of RT #6 [4141992, 4146362] DEXQc_UvrD PHA02517 RVT-GII GIIM Feature: gene Location: 323439-323639 bp Feature: gene Location: 323736-323894 bp Ori: AFG39186.1 Feature: domain Description: PHA02517 Location: 323739-323859 bp Feature: domain Description: PHA0251 7 Location: 323739-323859 bp Feature: gene Location: 324059-325567 bp Ori: AFG39187.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 324317-325049 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32431 7-325049 bp Feature: domain Description: GIIM Note: maturase Location: 325124-325322 bp Feature: domain Description: GIIM Note: maturase Location: 3251 24-325322 bp Feature: gene Location: 325876-326313 bp Feature: gene Location: 326174-326581 bp Ori: AFG39189.1 Gene: insO Feature: domain Description: PHA02517 Location: 326180-326516 bp Feature: domain Description: PHA0251 7 Location: 3261 80-32651 6 bp Feature: gene Location: 1142327-1142806 bp Ori: AFG39907.1 Feature: domain Description: PHA02517 Location: 1142387-1142741 bp Feature: domain Description: PHA0251 7 Location: 1 1 42387-1 1 42741 bp Feature: gene Location: 1142733-1143104 bp Feature: gene Location: 1143413-1144921 bp Ori: AFG39909.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1143671-1144403 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 43671 -1 1 44403 bp Feature: domain Description: GIIM Note: maturase Location: 1144478-1144676 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 44478-1 1 44676 bp Feature: gene Location: 1145098-1145484 bp Ori: AFG39910.1 Feature: domain Description: PHA02517 Location: 1145101-1145482 bp Feature: domain Description: PHA0251 7 Location: 1 1 451 01 -1 1 45482 bp Feature: gene Location: 1145448-1148948 bp Ori: AFG39911.1 Feature: domain Description: BID_1 Location: 1145493-1145736 bp Feature: domain Description: BID_1 Location: 1 1 45493-1 1 45736 bp Feature: domain Description: BID_1 Location: 1145835-1146012 bp Feature: domain Description: BID_1 Location: 1 1 45835-1 1 4601 2 bp Feature: domain Description: BID_1 Location: 1146102-1146369 bp Feature: domain Description: BID_1 Location: 1 1 461 02-1 1 46369 bp Feature: domain Description: BID_1 Location: 1146408-1146672 bp Feature: domain Description: BID_1 Location: 1 1 46408-1 1 46672 bp Feature: domain Description: BID_1 Location: 1146705-1146978 bp Feature: domain Description: BID_1 Location: 1 1 46705-1 1 46978 bp Feature: domain Description: BID_1 Location: 1147014-1147281 bp Feature: domain Description: BID_1 Location: 1 1 4701 4-1 1 47281 bp Feature: domain Description: BID_1 Location: 1147311-1147587 bp Feature: domain Description: BID_1 Location: 1 1 4731 1 -1 1 47587 bp Feature: domain Description: BID_1 Location: 1147623-1147887 bp Feature: domain Description: BID_1 Location: 1 1 47623-1 1 47887 bp Feature: domain Description: BID_1 Location: 1147920-1148196 bp Feature: domain Description: BID_1 Location: 1 1 47920-1 1 481 96 bp Feature: domain Description: BID_1 Location: 1148232-1148496 bp Feature: domain Description: BID_1 Location: 1 1 48232-1 1 48496 bp Feature: domain Description: BID_1 Location: 1148532-1148829 bp Feature: domain Description: BID_1 Location: 1 1 48532-1 1 48829 bp Feature: gene Location: 1266939-1267151 bp Ori: AFG40037.1 Feature: domain Description: PHA02517 Location: 1266942-1267086 bp Feature: domain Description: PHA0251 7 Location: 1 266942-1 267086 bp Feature: gene Location: 1267100-1267450 bp Feature: gene Location: 1267759-1269267 bp Ori: AFG40039.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1268017-1268749 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 26801 7-1 268749 bp Feature: domain Description: GIIM Note: maturase Location: 1268824-1269022 bp Feature: domain Description: GIIM Note: maturase Location: 1 268824-1 269022 bp Feature: gene Location: 1269432-1269806 bp Ori: AFG40040.1 Feature: domain Description: PHA02517 Location: 1269453-1269798 bp Feature: domain Description: PHA0251 7 Location: 1 269453-1 269798 bp Feature: gene Location: 1273810-1274904 bp Ori: AFG40042.1 Feature: domain Description: DEXXQc_SF1 Location: 1273819-1274488 bp Feature: domain Description: DEXXQc_SF1 Location: 1 27381 9-1 274488 bp Feature: gene Location: 1275069-1275455 bp Ori: AFG40043.1 Feature: domain Description: PHA02517 Location: 1275072-1275453 bp Feature: domain Description: PHA0251 7 Location: 1 275072-1 275453 bp Feature: gene Location: 1275632-1277140 bp Ori: AFG40044.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1275890-1276622 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 275890-1 276622 bp Feature: domain Description: GIIM Note: maturase Location: 1276697-1276895 bp Feature: domain Description: GIIM Note: maturase Location: 1 276697-1 276895 bp Feature: gene Location: 1277748-1278173 bp Ori: AFG40045.1 Feature: domain Description: PHA02517 Location: 1277769-1278108 bp Feature: domain Description: PHA0251 7 Location: 1 277769-1 2781 08 bp Feature: gene Location: 1279073-1279738 bp Ori: AFG40046.1 Feature: domain Description: PRK10396 Location: 1279076-1279736 bp Feature: domain Description: PRK1 0396 Location: 1 279076-1 279736 bp Feature: gene Location: 1718824-1719024 bp Feature: gene Location: 1719040-1719531 bp Feature: gene Location: 1720004-1721350 bp Ori: AFG40456.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1720100-1720832 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 7201 00-1 720832 bp Feature: domain Description: GIIM Note: maturase Location: 1720907-1721105 bp Feature: domain Description: GIIM Note: maturase Location: 1 720907-1 721 1 05 bp Feature: gene Location: 1721770-1721970 bp Feature: gene Location: 1721892-1722968 bp Ori: AFG40458.1 Feature: domain Description: COG3547 Location: 1721931-1722852 bp Feature: domain Description: COG3547 Location: 1 721 931 -1 722852 bp Feature: gene Location: 4141992-4142930 bp Ori: AFG42607.1 Feature: domain Description: DEXQc_UvrD Location: 4142211-4142466 bp Feature: domain Description: DEXQc_UvrD Location: 41 4221 1 -41 42466 bp Feature: gene Location: 4143088-4143480 bp Ori: AFG42608.1 Feature: domain Description: PHA02517 Location: 4143094-4143472 bp Feature: domain Description: PHA0251 7 Location: 41 43094-41 43472 bp Feature: gene Location: 4143645-4145153 bp Ori: AFG42609.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4143903-4144635 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 43903-41 44635 bp Feature: domain Description: GIIM Note: maturase Location: 4144710-4144908 bp Feature: domain Description: GIIM Note: maturase Location: 41 4471 0-41 44908 bp Feature: gene Location: 4145462-4145872 bp Feature: gene Location: 4146120-4146362 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), BID_1 (smart00634), DEXXQc_SF1 (cd18043), PRK10396 (hypothetical protein; Provisional), COG3547 (Transposase ), DEXQc_UvrD (cd17932)