myRT

myRT report for GCA_000262125.1_ASM26212v1

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Seq: CP001926.1 Escherichia coli Xuzhou21 plasmid pO157, complete sequence (92728 bp)
Overview 1 RT 1: 32838-39287 bp Neighborhood of RT #1 [32838, 39287] PRK13705 PRK13698 RVT_N RVT-GII YkfC HNHc DUF1281 DUF1281_C Feature: gene Location: 32838-34004 bp Ori: AFJ32126.1 Gene: sopA Feature: domain Description: PRK13705 Location: 32841-34002 bp Feature: domain Description: PRK1 3705 Location: 32841 -34002 bp Feature: gene Location: 34004-34975 bp Ori: AFJ32127.1 Gene: sopB Feature: domain Description: PRK13698 Location: 34007-34970 bp Feature: domain Description: PRK1 3698 Location: 34007-34970 bp Feature: gene Location: 36275-37999 bp Ori: AFJ32128.1 Feature: domain Description: RVT_N Location: 36332-36569 bp Feature: domain Description: RVT_N Location: 36332-36569 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36620-37268 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36620-37268 bp Feature: domain Description: YkfC Location: 37400-37556 bp Feature: domain Description: YkfC Location: 37400-37556 bp Feature: domain Description: HNHc Note: nucleases Location: 37784-37943 bp Feature: domain Description: HNHc Note: nucleases Location: 37784-37943 bp Feature: gene Location: 38076-38978 bp Ori: AFJ32129.1 Feature: domain Description: DUF1281 Location: 38145-38673 bp Feature: domain Description: DUF1 281 Location: 381 45-38673 bp Feature: domain Description: DUF1281_C Location: 38679-38907 bp Feature: domain Description: DUF1 281 _C Location: 38679-38907 bp Feature: gene Location: 38982-39287 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13705 (plasmid-partitioning protein SopA; Provisional), PRK13698 (ParB/RepB/Spo0J family plasmid partition protein), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507), DUF1281 (pfam06924), DUF1281_C (pfam18406)