myRT

myRT report for GCA_000280925.3_ASM28092v3

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Seq: CP012109.1 Myxococcus hansupus strain mixupus, complete genome (9490432 bp)
Overview 1 RT 1: 1385907-1391968 bp 2 RT 2: 1766040-1773797 bp 3 RT 3: 2931265-2933708 bp 4 RT 4: 8456646-8469441 bp Neighborhood of RT #1 [1385907, 1392210] COG4941 RVT-Retrons DnaK Neighborhood of RT #2 [1766040, 1773797] RVT-Retrons ADOP Neighborhood of RT #3 [2931265, 2933708] SMI1_KNR4 DDE_Tnp_IS66_C RVT-GII Neighborhood of RT #4 [8456646, 8469458] KOG0266 KOG0308 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 RVT-Retrons DAP2 BetA BetA BetA Feature: gene Location: 1385907-1386134 bp Feature: gene Location: 1386923-1388200 bp Ori: AKQ64265.1 Feature: domain Description: COG4941 Location: 1386950-1388183 bp Feature: domain Description: COG4941 Location: 1 386950-1 3881 83 bp Feature: gene Location: 1388478-1389827 bp Ori: AKQ64266.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1388940-1389594 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 388940-1 389594 bp Feature: gene Location: 1389837-1390415 bp Feature: gene Location: 1390492-1392210 bp Ori: AKQ64268.1 Feature: domain Description: DnaK Location: 1390495-1391968 bp Feature: domain Description: DnaK Location: 1 390495-1 391 968 bp Feature: gene Location: 1766040-1767905 bp Feature: gene Location: 1767902-1769494 bp Feature: gene Location: 1769660-1770946 bp Ori: AKQ64613.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1770125-1770725 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 7701 25-1 770725 bp Feature: gene Location: 1771151-1773625 bp Ori: AKQ64614.1 Feature: domain Description: ADOP Location: 1771163-1773623 bp Feature: domain Description: ADOP Location: 1 771 1 63-1 773623 bp Feature: gene Location: 1773678-1773797 bp Feature: gene Location: 2931265-2931627 bp Ori: AKQ65509.1 Feature: domain Description: SMI1_KNR4 Location: 2931271-2931583 bp Feature: domain Description: SMI1 _KNR4 Location: 2931 271 -2931 583 bp Feature: gene Location: 2931763-2932020 bp Ori: AKQ65510.1 Feature: domain Description: DDE_Tnp_IS66_C Location: 2931766-2931871 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2931 766-2931 871 bp Feature: gene Location: 2932102-2933346 bp Ori: AKQ65511.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2932366-2933053 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2932366-2933053 bp Feature: gene Location: 2933466-2933708 bp Feature: gene Location: 8456646-8463182 bp Ori: AKQ69957.1 Feature: domain Description: KOG0266 Location: 8456838-8457255 bp Feature: domain Description: KOG0266 Location: 8456838-8457255 bp Feature: domain Description: KOG0308 Location: 8457372-8457567 bp Feature: domain Description: KOG0308 Location: 8457372-8457567 bp Feature: domain Description: HEAT_2 Location: 8457678-8457888 bp Feature: domain Description: HEAT_2 Location: 8457678-8457888 bp Feature: domain Description: HEAT_2 Location: 8458494-8458731 bp Feature: domain Description: HEAT_2 Location: 8458494-8458731 bp Feature: domain Description: HEAT_2 Location: 8458983-8459214 bp Feature: domain Description: HEAT_2 Location: 8458983-845921 4 bp Feature: domain Description: HEAT_2 Location: 8459574-8459805 bp Feature: domain Description: HEAT_2 Location: 8459574-8459805 bp Feature: domain Description: HEAT_2 Location: 8460441-8460624 bp Feature: domain Description: HEAT_2 Location: 8460441 -8460624 bp Feature: domain Description: HEAT_2 Location: 8460666-8460876 bp Feature: domain Description: HEAT_2 Location: 8460666-8460876 bp Feature: domain Description: HEAT_2 Location: 8461029-8461275 bp Feature: domain Description: HEAT_2 Location: 8461 029-8461 275 bp Feature: domain Description: HEAT_2 Location: 8461338-8461497 bp Feature: domain Description: HEAT_2 Location: 8461 338-8461 497 bp Feature: domain Description: HEAT_2 Location: 8461902-8462103 bp Feature: domain Description: HEAT_2 Location: 8461 902-84621 03 bp Feature: domain Description: HEAT_2 Location: 8462604-8462832 bp Feature: domain Description: HEAT_2 Location: 8462604-8462832 bp Feature: domain Description: HEAT_2 Location: 8462958-8463096 bp Feature: domain Description: HEAT_2 Location: 8462958-8463096 bp Feature: gene Location: 8463179-8465032 bp Feature: gene Location: 8465433-8466887 bp Ori: AKQ69959.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8465991-8466633 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8465991 -8466633 bp Feature: gene Location: 8466891-8467784 bp Ori: AKQ69960.1 Feature: domain Description: DAP2 Location: 8467026-8467602 bp Feature: domain Description: DAP2 Location: 8467026-8467602 bp Feature: gene Location: 8468025-8469458 bp Ori: AKQ69961.1 Feature: domain Description: BetA Location: 8468028-8468445 bp Feature: domain Description: BetA Location: 8468028-8468445 bp Feature: domain Description: BetA Location: 8468574-8468886 bp Feature: domain Description: BetA Location: 8468574-8468886 bp Feature: domain Description: BetA Location: 8469018-8469441 bp Feature: domain Description: BetA Location: 846901 8-8469441 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4941 (Predicted RNA polymerase sigma factor, contains C-terminal TPR domain ), RVT-Retrons, DnaK (COG0443), ADOP (TIGR03434), SMI1_KNR4 (smart00860), DDE_Tnp_IS66_C (pfam13817), RVT-GII, KOG0266 (KOG0266, WD40 repeat-containing protein ), KOG0308 (KOG0308, Conserved WD40 repeat-containing protein ), HEAT_2 (pfam13646)
DAP2 (COG1506), BetA (COG2303)