myRT

myRT report for GCA_000281435.2_ASM28143v2

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Seq: CP007729.1 Klebsiella pneumoniae subsp. pneumoniae KPNIH10 plasmid pKPN-498, complete sequence (243824 bp)
Overview 1 RT 1: 183751-188745 bp Neighborhood of RT #1 [183751, 188747] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 183751-185022 bp Ori: AIA39579.1 Feature: domain Description: umuC Location: 183754-185017 bp Feature: domain Description: umuC Location: 1 83754-1 8501 7 bp Feature: gene Location: 185022-185447 bp Ori: AIA39580.1 Feature: domain Description: PRK10276 Location: 185025-185433 bp Feature: domain Description: PRK1 0276 Location: 1 85025-1 85433 bp Feature: gene Location: 185850-187337 bp Ori: AIA39581.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 186255-186945 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 86255-1 86945 bp Feature: gene Location: 187571-187801 bp Feature: gene Location: 188322-188747 bp Ori: AIA39583.1 Feature: domain Description: Antirestrict Location: 188457-188745 bp Feature: domain Description: Antirestrict Location: 1 88457-1 88745 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: CP007727.1 Klebsiella pneumoniae subsp. pneumoniae KPNIH10, complete genome (5395263 bp)
Overview 1 RT 1: 1334412-1337819 bp 2 RT 2: 1775758-1781306 bp 3 RT 3: 2118250-2123668 bp 4 RT 4: 2271608-2276763 bp 5 RT 5: 3513277-3519760 bp Neighborhood of RT #1 [1334412, 1337920] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1775758, 1781332] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [2118250, 2123670] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [2271608, 2276765] PinE XerC RVT-GII PRK10276 umuC Neighborhood of RT #5 [3513277, 3519762] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 1334412-1335143 bp Ori: AIA35585.1 Feature: domain Description: Laminin_G_3 Location: 1334733-1335087 bp Feature: domain Description: Laminin_G_3 Location: 1334733-1335087 bp Feature: gene Location: 1335140-1335349 bp Feature: gene Location: 1335799-1337286 bp Ori: AIA35587.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1336204-1336894 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13362 04-1336894 bp Feature: gene Location: 1337364-1337603 bp Feature: gene Location: 1337603-1337920 bp Ori: AIA35589.1 Feature: domain Description: PRK10276 Location: 1337609-1337723 bp Feature: domain Description: PRK102 76 Location: 1337609-133772 3 bp Feature: domain Description: PRK10276 Location: 1337750-1337819 bp Feature: domain Description: PRK102 76 Location: 1337750-1337819 bp Feature: gene Location: 1775758-1776321 bp Ori: AIA35977.1 Feature: domain Description: YbjK Location: 1775764-1776301 bp Feature: domain Description: YbjK Location: 1775764-1776301 bp Feature: gene Location: 1776444-1777496 bp Ori: AIA35978.1 Feature: domain Description: int Location: 1776447-1777446 bp Feature: domain Description: int Location: 1776447-1777446 bp Feature: gene Location: 1777912-1779399 bp Ori: AIA35979.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1778317-1779007 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1778317-1779007 bp Feature: gene Location: 1779498-1780442 bp Feature: gene Location: 1780454-1781332 bp Ori: AIA35981.1 Feature: domain Description: Phage_CI_repr Location: 1780481-1780664 bp Feature: domain Description: Phage_CI_repr Location: 1780481-1780664 bp Feature: domain Description: Phage_CI_repr Location: 1780793-1780985 bp Feature: domain Description: Phage_CI_repr Location: 1780793-1780985 bp Feature: domain Description: Phage_CI_C Location: 1781012-1781306 bp Feature: domain Description: Phage_CI_C Location: 1781012 -1781306 bp Feature: gene Location: 2118250-2119389 bp Ori: AIA36292.1 Feature: domain Description: GT9_LPS_heptosyltransferase Location: 2118433-2119333 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 2 118433-2 119333 bp Feature: gene Location: 2119560-2119802 bp Ori: AIA36293.1 Feature: domain Description: DinI Location: 2119611-2119791 bp Feature: domain Description: DinI Location: 2 119611-2 119791 bp Feature: gene Location: 2120417-2121904 bp Ori: AIA36294.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2120822-2121512 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 12 082 2 -2 12 1512 bp Feature: gene Location: 2121983-2122402 bp Ori: AIA36295.1 Feature: domain Description: PRK10276 Location: 2121986-2122397 bp Feature: domain Description: PRK102 76 Location: 2 12 1986-2 12 2 397 bp Feature: gene Location: 2122405-2123670 bp Ori: AIA36296.1 Feature: domain Description: umuC Location: 2122408-2123668 bp Feature: domain Description: umuC Location: 2 12 2 408-2 12 3668 bp Feature: gene Location: 2271608-2272117 bp Ori: AIA36439.1 Feature: domain Description: PinE Location: 2271656-2272109 bp Feature: domain Description: PinE Location: 2 2 71656-2 2 72 109 bp Feature: gene Location: 2272195-2272617 bp Ori: AIA36440.1 Feature: domain Description: XerC Location: 2272231-2272576 bp Feature: domain Description: XerC Location: 2 2 72 2 31-2 2 72 576 bp Feature: gene Location: 2273512-2274999 bp Ori: AIA36441.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2273917-2274607 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 73917-2 2 74607 bp Feature: gene Location: 2275079-2275498 bp Ori: AIA36442.1 Feature: domain Description: PRK10276 Location: 2275082-2275493 bp Feature: domain Description: PRK102 76 Location: 2 2 75082 -2 2 75493 bp Feature: gene Location: 2275500-2276765 bp Ori: AIA36443.1 Feature: domain Description: umuC Location: 2275503-2276763 bp Feature: domain Description: umuC Location: 2 2 75503-2 2 76763 bp Feature: gene Location: 3513277-3514335 bp Ori: AIA37628.1 Feature: domain Description: YccC Location: 3513283-3514321 bp Feature: domain Description: YccC Location: 35132 83-351432 1 bp Feature: gene Location: 3514434-3514907 bp Ori: AIA37629.1 Feature: domain Description: PRK10016 Location: 3514437-3514896 bp Feature: domain Description: PRK10016 Location: 3514437-3514896 bp Feature: gene Location: 3514989-3516476 bp Ori: AIA37630.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3515394-3516084 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3515394-3516084 bp Feature: gene Location: 3516994-3518157 bp Ori: AIA37631.1 Feature: domain Description: dacD Location: 3516997-3518152 bp Feature: domain Description: dacD Location: 3516997-3518152 bp Feature: gene Location: 3518338-3519762 bp Ori: AIA37632.1 Gene: sbcB Feature: domain Description: SbcB Location: 3518344-3519760 bp Feature: domain Description: SbcB Location: 3518344-3519760 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
PinE (COG1961), XerC (COG4973), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)