myRT

myRT report for GCA_000281535.2_ASM28153v2

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Seq: CP008827.1 Klebsiella pneumoniae subsp. pneumoniae KPNIH1, complete genome (5394056 bp)
Overview 1 RT 1: 1334412-1337819 bp 2 RT 2: 1775758-1781306 bp 3 RT 3: 2118250-2123668 bp 4 RT 4: 2270898-2276763 bp 5 RT 5: 3512074-3518557 bp Neighborhood of RT #1 [1334412, 1337920] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1775758, 1781332] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [2118250, 2123670] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [2270898, 2276765] Rve XerC RVT-GII PRK10276 umuC Neighborhood of RT #5 [3512074, 3518559] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 1334412-1335143 bp Ori: AIE21898.1 Feature: domain Description: Laminin_G_3 Location: 1334733-1335087 bp Feature: domain Description: Laminin_G_3 Location: 1 334733-1 335087 bp Feature: gene Location: 1335140-1335349 bp Feature: gene Location: 1335802-1337286 bp Ori: AIE21900.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1336204-1336894 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 336204-1 336894 bp Feature: gene Location: 1337364-1337603 bp Feature: gene Location: 1337603-1337920 bp Ori: AIE21902.1 Feature: domain Description: PRK10276 Location: 1337609-1337723 bp Feature: domain Description: PRK1 0276 Location: 1 337609-1 337723 bp Feature: domain Description: PRK10276 Location: 1337750-1337819 bp Feature: domain Description: PRK1 0276 Location: 1 337750-1 33781 9 bp Feature: gene Location: 1775758-1776321 bp Ori: AIE22290.1 Feature: domain Description: YbjK Location: 1775764-1776301 bp Feature: domain Description: YbjK Location: 1 775764-1 776301 bp Feature: gene Location: 1776444-1777496 bp Ori: AIE22291.1 Feature: domain Description: int Location: 1776447-1777446 bp Feature: domain Description: int Location: 1 776447-1 777446 bp Feature: gene Location: 1777912-1779399 bp Ori: AIE22292.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1778317-1779007 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 77831 7-1 779007 bp Feature: gene Location: 1779498-1780442 bp Feature: gene Location: 1780454-1781332 bp Ori: AIE22294.1 Feature: domain Description: Phage_CI_repr Location: 1780481-1780664 bp Feature: domain Description: Phage_CI_repr Location: 1 780481 -1 780664 bp Feature: domain Description: Phage_CI_repr Location: 1780793-1780985 bp Feature: domain Description: Phage_CI_repr Location: 1 780793-1 780985 bp Feature: domain Description: Phage_CI_C Location: 1781012-1781306 bp Feature: domain Description: Phage_CI_C Location: 1 781 01 2-1 781 306 bp Feature: gene Location: 2118250-2119389 bp Ori: AIE22606.1 Feature: domain Description: GT9_LPS_heptosyltransferase Location: 2118433-2119333 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 21 1 8433-21 1 9333 bp Feature: gene Location: 2119560-2119802 bp Ori: AIE22607.1 Feature: domain Description: DinI Location: 2119611-2119791 bp Feature: domain Description: DinI Location: 21 1 961 1 -21 1 9791 bp Feature: gene Location: 2120420-2121904 bp Ori: AIE22608.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2120822-2121512 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 20822-21 21 51 2 bp Feature: gene Location: 2121983-2122402 bp Ori: AIE22609.1 Feature: domain Description: PRK10276 Location: 2121986-2122397 bp Feature: domain Description: PRK1 0276 Location: 21 21 986-21 22397 bp Feature: gene Location: 2122405-2123670 bp Ori: AIE22610.1 Feature: domain Description: umuC Location: 2122408-2123668 bp Feature: domain Description: umuC Location: 21 22408-21 23668 bp Feature: gene Location: 2270898-2271602 bp Ori: AIE22751.1 Feature: domain Description: Rve Location: 2270901-2271546 bp Feature: domain Description: Rve Location: 2270901 -2271 546 bp Feature: gene Location: 2272195-2272617 bp Ori: AIE22752.1 Feature: domain Description: XerC Location: 2272231-2272576 bp Feature: domain Description: XerC Location: 2272231 -2272576 bp Feature: gene Location: 2273515-2274999 bp Ori: AIE22753.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2273917-2274607 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 227391 7-2274607 bp Feature: gene Location: 2275079-2275498 bp Ori: AIE22754.1 Feature: domain Description: PRK10276 Location: 2275082-2275493 bp Feature: domain Description: PRK1 0276 Location: 2275082-2275493 bp Feature: gene Location: 2275500-2276765 bp Ori: AIE22755.1 Feature: domain Description: umuC Location: 2275503-2276763 bp Feature: domain Description: umuC Location: 2275503-2276763 bp Feature: gene Location: 3512074-3513132 bp Ori: AIE23939.1 Feature: domain Description: YccC Location: 3512080-3513118 bp Feature: domain Description: YccC Location: 351 2080-351 31 1 8 bp Feature: gene Location: 3513231-3513704 bp Ori: AIE23940.1 Feature: domain Description: PRK10016 Location: 3513234-3513693 bp Feature: domain Description: PRK1 001 6 Location: 351 3234-351 3693 bp Feature: gene Location: 3513786-3515270 bp Ori: AIE23941.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3514188-3514878 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 351 41 88-351 4878 bp Feature: gene Location: 3515791-3516954 bp Ori: AIE23942.1 Feature: domain Description: dacD Location: 3515794-3516949 bp Feature: domain Description: dacD Location: 351 5794-351 6949 bp Feature: gene Location: 3517135-3518559 bp Ori: AIE23943.1 Gene: sbcB Feature: domain Description: SbcB Location: 3517141-3518557 bp Feature: domain Description: SbcB Location: 351 71 41 -351 8557 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
Rve (COG3316), XerC (COG4973), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)

Seq: CP008829.1 Klebsiella pneumoniae subsp. pneumoniae KPNIH1 plasmid pKPN-498, complete sequence (243824 bp)
Overview 1 RT 1: 183751-188745 bp Neighborhood of RT #1 [183751, 188747] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 183751-185022 bp Ori: AIE25893.1 Feature: domain Description: umuC Location: 183754-185017 bp Feature: domain Description: umuC Location: 183754-185017 bp Feature: gene Location: 185022-185447 bp Ori: AIE25894.1 Feature: domain Description: PRK10276 Location: 185025-185433 bp Feature: domain Description: PRK102 76 Location: 18502 5-185433 bp Feature: gene Location: 185853-187337 bp Ori: AIE25895.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 186255-186945 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1862 55-186945 bp Feature: gene Location: 187571-187801 bp Feature: gene Location: 188322-188747 bp Ori: AIE25897.1 Feature: domain Description: Antirestrict Location: 188457-188745 bp Feature: domain Description: Antirestrict Location: 188457-188745 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)