myRT

myRT report for GCA_000283275.1_ASM28327v1

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Seq: CP003735.1 Marinobacter sp. BSs20148, complete genome (4063864 bp)
Overview 1 RT 1: 2029691-2033989 bp 2 RT 2: 2150260-2153731 bp 3 RT 3: 3532675-3541473 bp 4 RT 4: 4017567-4025860 bp Neighborhood of RT #1 [2029691, 2034009] TnpB_IS66 RVT-UG4 COG4446 Neighborhood of RT #2 [2150260, 2153742] UbiE LysR RVT-UG4 NIPSNAP Neighborhood of RT #3 [3532675, 3541502] RVT-UG4 COG1033 LolA_like Neighborhood of RT #4 [4017567, 4026042] Doc RVT-UG5 nitrilase TnsE_C TniQ TnsD TnsD Feature: gene Location: 2029691-2029822 bp Feature: gene Location: 2030035-2030220 bp Ori: AFP30856.1 Feature: domain Description: TnpB_IS66 Location: 2030077-2030212 bp Feature: domain Description: TnpB_IS66 Location: 2030077-203021 2 bp Feature: gene Location: 2030427-2031482 bp Ori: AFP30857.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2030760-2031210 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2030760-2031 21 0 bp Feature: gene Location: 2033137-2033253 bp Feature: gene Location: 2033725-2034009 bp Ori: AFP30859.1 Feature: domain Description: COG4446 Location: 2033761-2033989 bp Feature: domain Description: COG4446 Location: 2033761 -2033989 bp Feature: gene Location: 2150260-2151135 bp Ori: AFP30976.1 Feature: domain Description: UbiE Location: 2150398-2150740 bp Feature: domain Description: UbiE Location: 21 50398-21 50740 bp Feature: gene Location: 2151255-2152133 bp Ori: AFP30977.1 Gene: ycaN Feature: domain Description: LysR Location: 2151258-2152095 bp Feature: domain Description: LysR Location: 21 51 258-21 52095 bp Feature: gene Location: 2152349-2152675 bp Ori: AFP30978.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2152358-2152652 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 21 52358-21 52652 bp Feature: gene Location: 2152874-2153002 bp Feature: gene Location: 2153434-2153742 bp Ori: AFP30980.1 Feature: domain Description: NIPSNAP Location: 2153452-2153731 bp Feature: domain Description: NIPSNAP Location: 21 53452-21 53731 bp Feature: gene Location: 3532675-3532851 bp Feature: gene Location: 3534121-3534255 bp Feature: gene Location: 3534469-3535509 bp Ori: AFP32306.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3534802-3535252 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3534802-3535252 bp Feature: gene Location: 3537086-3538336 bp Feature: gene Location: 3538353-3541502 bp Ori: AFP32308.1 Feature: domain Description: COG1033 Location: 3538401-3540675 bp Feature: domain Description: COG1 033 Location: 3538401 -3540675 bp Feature: domain Description: LolA_like Location: 3540783-3541473 bp Feature: domain Description: LolA_like Location: 3540783-3541 473 bp Feature: gene Location: 4017567-4018580 bp Feature: gene Location: 4018582-4019070 bp Ori: AFP32789.1 Feature: domain Description: Doc Location: 4018645-4018975 bp Feature: domain Description: Doc Location: 401 8645-401 8975 bp Feature: gene Location: 4019076-4022297 bp Ori: AFP32790.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 4019607-4020108 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 401 9607-40201 08 bp Feature: domain Description: nitrilase Location: 4021596-4022208 bp Feature: domain Description: nitrilase Location: 4021 596-4022208 bp Feature: gene Location: 4022936-4024546 bp Ori: AFP32791.1 Gene: tnsE Feature: domain Description: TnsE_C Location: 4024106-4024529 bp Feature: domain Description: TnsE_C Location: 40241 06-4024529 bp Feature: gene Location: 4024543-4026042 bp Ori: AFP32792.1 Gene: tnsD Feature: domain Description: TniQ Location: 4024552-4025002 bp Feature: domain Description: TniQ Location: 4024552-4025002 bp Feature: domain Description: TnsD Location: 4025134-4025407 bp Feature: domain Description: TnsD Location: 40251 34-4025407 bp Feature: domain Description: TnsD Location: 4025497-4025860 bp Feature: domain Description: TnsD Location: 4025497-4025860 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), RVT-UG4, COG4446 (Uncharacterized conserved protein, DUF1499 family ), UbiE (COG2226), LysR (COG0583), NIPSNAP (pfam07978), COG1033 (Predicted exporter protein, RND superfamily ), LolA_like (pfam17131), Doc (COG3654), RVT-UG5
nitrilase (cl11424), TnsE_C (pfam18623), TniQ (pfam06527), TnsD (pfam15978)