myRT

myRT report for GCA_000283715.1_ASM28371v1

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Seq: HE616529.1 Shigella sonnei 53G plasmid A, complete genome (215774 bp)
Overview 1 RT 1: 27544-31992 bp 2 RT 2: 138776-142582 bp Neighborhood of RT #1 [27544, 32042] COG3547 RVT-GII GIIM RVT-GII COG4584 PRK09183 Neighborhood of RT #2 [138776, 142584] RVT-GII GIIM RVT-GII Tra5 PRK09409 Feature: gene Location: 27544-28029 bp Feature: domain Description: COG3547 Location: 27562-27994 bp Feature: domain Description: COG3547 Location: 27562-27994 bp Feature: gene Location: 28125-28292 bp Feature: gene Location: 28318-28845 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28324-28468 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28324-28468 bp Feature: domain Description: GIIM Note: maturase Location: 28546-28768 bp Feature: domain Description: GIIM Note: maturase Location: 28546-28768 bp Feature: gene Location: 28860-29549 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29061-29523 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29061 -29523 bp Feature: gene Location: 30073-31245 bp Feature: domain Description: COG4584 Location: 30076-30913 bp Feature: domain Description: COG4584 Location: 30076-3091 3 bp Feature: gene Location: 31245-32042 bp Feature: domain Description: PRK09183 Location: 31257-31992 bp Feature: domain Description: PRK091 83 Location: 31 257-31 992 bp Feature: gene Location: 138776-139018 bp Feature: gene Location: 139190-139345 bp Feature: gene Location: 139371-139898 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 139377-139521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 39377-1 39521 bp Feature: domain Description: GIIM Note: maturase Location: 139605-139821 bp Feature: domain Description: GIIM Note: maturase Location: 1 39605-1 39821 bp Feature: gene Location: 139908-140180 bp Feature: gene Location: 140197-141324 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 140497-141154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 40497-1 41 1 54 bp Feature: gene Location: 141337-141558 bp Feature: domain Description: Tra5 Location: 141349-141541 bp Feature: domain Description: Tra5 Location: 1 41 349-1 41 541 bp Feature: gene Location: 141679-142584 bp Feature: domain Description: PRK09409 Location: 141682-142582 bp Feature: domain Description: PRK09409 Location: 1 41 682-1 42582 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388), COG4584 (Transposase ), PRK09183 (transposase/IS protein; Provisional), Tra5 (COG2801), PRK09409 (IS2 transposase TnpB; Reviewed)