myRT

myRT report for GCA_000284195.1_ASM28419v1

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Seq: CP003341.1 Rickettsia parkeri str. Portsmouth, complete genome (1300386 bp)
Overview 1 RT 1: 710065-718905 bp Neighborhood of RT #1 [710065, 718925] IS285 GIIM RVT-GII RVT_N RVT-GII TraA_Ti TraI_TIGR Transposase_31 YadD Feature: gene Location: 710065-711195 bp Ori: AFC74898.1 Feature: domain Description: IS285 Location: 710128-711190 bp Feature: domain Description: IS285 Location: 71 01 28-71 1 1 90 bp Feature: gene Location: 711603-711968 bp Ori: AFC74899.1 Feature: domain Description: GIIM Note: maturase Location: 711621-711819 bp Feature: domain Description: GIIM Note: maturase Location: 71 1 621 -71 1 81 9 bp Feature: gene Location: 712276-712383 bp Ori: AFC74900.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 712279-712378 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71 2279-71 2378 bp Feature: gene Location: 712487-713059 bp Ori: AFC74901.1 Feature: domain Description: RVT_N Location: 712547-712793 bp Feature: domain Description: RVT_N Location: 71 2547-71 2793 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 712841-712979 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71 2841 -71 2979 bp Feature: gene Location: 713785-717921 bp Ori: AFC74902.1 Feature: domain Description: TraA_Ti Location: 713788-715978 bp Feature: domain Description: TraA_Ti Location: 71 3788-71 5978 bp Feature: domain Description: TraI_TIGR Location: 716260-717604 bp Feature: domain Description: TraI_TIGR Location: 71 6260-71 7604 bp Feature: gene Location: 717933-718925 bp Ori: AFC74903.1 Feature: domain Description: Transposase_31 Location: 717987-718551 bp Feature: domain Description: Transposase_31 Location: 71 7987-71 8551 bp Feature: domain Description: YadD Location: 718629-718905 bp Feature: domain Description: YadD Location: 71 8629-71 8905 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IS285 (COG3328), GIIM (pfam08388), RVT-GII, RVT_N (pfam13655), TraA_Ti (TIGR02768), TraI_TIGR (TIGR02760), Transposase_31 (pfam04754), YadD (COG5464)