myRT

myRT report for GCA_000284315.1_ASM28431v1

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Seq: AP012342.1 Leptospirillum ferrooxidans C2-3 DNA, complete genome (2559538 bp)
Overview 1 RT 1: 1321829-1324110 bp 2 RT 2: 1337809-1340762 bp 3 RT 3: 1582275-1588025 bp Neighborhood of RT #1 [1321829, 1324110] HigB_toxin HigA RVT-GII GIIM Neighborhood of RT #2 [1337809, 1340866] HTH_Tnp_1 HTH_Tnp_1 RVT_N RVT-GII Transposase_mut Neighborhood of RT #3 [1582275, 1588666] PqqL COG3547 RVT_N RVT-GII GIIM COG4584 Feature: gene Location: 1321829-1322131 bp Ori: BAM06994.1 Feature: domain Description: HigB_toxin Location: 1321898-1322114 bp Feature: domain Description: HigB_toxin Location: 1 321 898-1 3221 1 4 bp Feature: gene Location: 1322143-1322517 bp Ori: BAM06995.1 Feature: domain Description: HigA Location: 1322152-1322488 bp Feature: domain Description: HigA Location: 1 3221 52-1 322488 bp Feature: gene Location: 1322539-1323147 bp Ori: BAM06996.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1322578-1323112 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 322578-1 3231 1 2 bp Feature: gene Location: 1323179-1323619 bp Ori: BAM06997.1 Feature: domain Description: GIIM Note: maturase Location: 1323185-1323404 bp Feature: domain Description: GIIM Note: maturase Location: 1 3231 85-1 323404 bp Feature: gene Location: 1323928-1324110 bp Feature: gene Location: 1337809-1338075 bp Feature: gene Location: 1337999-1338781 bp Ori: BAM07016.1 Feature: domain Description: HTH_Tnp_1 Location: 1338011-1338152 bp Feature: domain Description: HTH_Tnp_1 Location: 1 33801 1 -1 3381 52 bp Feature: domain Description: HTH_Tnp_1 Location: 1338194-1338404 bp Feature: domain Description: HTH_Tnp_1 Location: 1 3381 94-1 338404 bp Feature: gene Location: 1338868-1339317 bp Ori: BAM07017.1 Feature: domain Description: RVT_N Location: 1338877-1339069 bp Feature: domain Description: RVT_N Location: 1 338877-1 339069 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1339114-1339306 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3391 1 4-1 339306 bp Feature: gene Location: 1339311-1339565 bp Feature: gene Location: 1339847-1340866 bp Ori: BAM07019.1 Feature: domain Description: Transposase_mut Location: 1339853-1340762 bp Feature: domain Description: Transposase_mut Location: 1 339853-1 340762 bp Feature: gene Location: 1582275-1583522 bp Ori: BAM07249.1 Feature: domain Description: PqqL Location: 1582290-1583505 bp Feature: domain Description: PqqL Location: 1 582290-1 583505 bp Feature: gene Location: 1584197-1584556 bp Ori: BAM07250.1 Feature: domain Description: COG3547 Location: 1584263-1584551 bp Feature: domain Description: COG3547 Location: 1 584263-1 584551 bp Feature: gene Location: 1585111-1586568 bp Ori: BAM07251.1 Feature: domain Description: RVT_N Location: 1585159-1585396 bp Feature: domain Description: RVT_N Location: 1 5851 59-1 585396 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1585447-1586065 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 585447-1 586065 bp Feature: domain Description: GIIM Note: maturase Location: 1586116-1586350 bp Feature: domain Description: GIIM Note: maturase Location: 1 5861 1 6-1 586350 bp Feature: gene Location: 1586835-1587110 bp Feature: gene Location: 1587185-1588666 bp Ori: BAM07253.1 Feature: domain Description: COG4584 Location: 1587212-1588025 bp Feature: domain Description: COG4584 Location: 1 58721 2-1 588025 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HigB_toxin (pfam09907), HigA (COG5499), RVT-GII, GIIM (pfam08388), HTH_Tnp_1 (pfam01527), RVT_N (pfam13655), Transposase_mut (pfam00872), PqqL (COG0612), COG3547 (Transposase ), COG4584 (Transposase )