myRT

myRT report for GCA_000284515.1_ASM28451v1

Download annotations/find similar RTs

Seq: HE717023.1 Halobacillus halophilus DSM 2266 complete genome (4150632 bp)
Overview 1 RT 1: 226494-236634 bp 2 RT 2: 673551-678597 bp 3 RT 3: 1003302-1008298 bp 4 RT 4: 1503704-1514450 bp 5 RT 5: 1527322-1533278 bp Neighborhood of RT #1 [226494, 236651] IlvB GAF GAF PRK10060 RVT-GII HNHc FeuA FepD Neighborhood of RT #2 [673551, 678617] RDD YdiL RVT-GII HNHc DUF2187 Neighborhood of RT #3 [1003302, 1008298] YaeI RVT-Retrons PRK09291 Neighborhood of RT #4 [1503704, 1514450] RVT-GII HNHc RVT-GII HNHc Neighborhood of RT #5 [1527322, 1533298] YckC RVT-GII HNHc PRK03140 Feature: gene Location: 226494-228128 bp Ori: CCG43601.1 Gene: ilvB1 Feature: domain Description: IlvB Location: 226497-228093 bp Feature: domain Description: IlvB Location: 226497-228093 bp Feature: gene Location: 228125-230947 bp Ori: CCG43602.1 Feature: domain Description: GAF Location: 228194-228632 bp Feature: domain Description: GAF Location: 2281 94-228632 bp Feature: domain Description: GAF Location: 228890-229118 bp Feature: domain Description: GAF Location: 228890-2291 1 8 bp Feature: domain Description: PRK10060 Location: 229286-230933 bp Feature: domain Description: PRK1 0060 Location: 229286-230933 bp Feature: gene Location: 231301-233148 bp Ori: CCG43603.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 231625-232324 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 231 625-232324 bp Feature: domain Description: HNHc Note: nucleases Location: 232879-233017 bp Feature: domain Description: HNHc Note: nucleases Location: 232879-23301 7 bp Feature: gene Location: 234435-235403 bp Ori: CCG43604.1 Feature: domain Description: FeuA Location: 234600-235350 bp Feature: domain Description: FeuA Location: 234600-235350 bp Feature: gene Location: 235596-236651 bp Ori: CCG43605.1 Feature: domain Description: FepD Location: 235677-236634 bp Feature: domain Description: FepD Location: 235677-236634 bp Feature: gene Location: 673551-673973 bp Ori: CCG44032.1 Gene: yckC1 Feature: domain Description: RDD Location: 673575-673950 bp Feature: domain Description: RDD Location: 673575-673950 bp Feature: gene Location: 674076-674771 bp Ori: CCG44033.1 Feature: domain Description: YdiL Location: 674103-674736 bp Feature: domain Description: YdiL Location: 6741 03-674736 bp Feature: gene Location: 675601-677448 bp Ori: CCG44034.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 675925-676624 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 675925-676624 bp Feature: domain Description: HNHc Note: nucleases Location: 677179-677317 bp Feature: domain Description: HNHc Note: nucleases Location: 6771 79-67731 7 bp Feature: gene Location: 677904-678104 bp Feature: gene Location: 678330-678617 bp Ori: CCG44036.1 Feature: domain Description: DUF2187 Location: 678423-678597 bp Feature: domain Description: DUF21 87 Location: 678423-678597 bp Feature: gene Location: 1003302-1004294 bp Ori: CCG44354.1 Feature: domain Description: YaeI Location: 1003332-1004283 bp Feature: domain Description: YaeI Location: 1 003332-1 004283 bp Feature: gene Location: 1004697-1005629 bp Feature: gene Location: 1005626-1006564 bp Ori: CCG44356.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1005728-1006283 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 005728-1 006283 bp Feature: gene Location: 1007131-1007916 bp Ori: CCG44357.1 Feature: domain Description: PRK09291 Location: 1007134-1007911 bp Feature: domain Description: PRK09291 Location: 1 0071 34-1 00791 1 bp Feature: gene Location: 1008140-1008298 bp Feature: gene Location: 1503704-1503796 bp Feature: gene Location: 1504066-1504317 bp Feature: gene Location: 1505051-1506898 bp Ori: CCG44833.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1505375-1506074 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 505375-1 506074 bp Feature: domain Description: HNHc Note: nucleases Location: 1506629-1506767 bp Feature: domain Description: HNHc Note: nucleases Location: 1 506629-1 506767 bp Feature: gene Location: 1508061-1508429 bp Feature: gene Location: 1509008-1509568 bp Feature: gene Location: 1509695-1510180 bp Feature: gene Location: 1510947-1512794 bp Ori: CCG44837.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1511271-1511970 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 51 1 271 -1 51 1 970 bp Feature: domain Description: HNHc Note: nucleases Location: 1512525-1512663 bp Feature: domain Description: HNHc Note: nucleases Location: 1 51 2525-1 51 2663 bp Feature: gene Location: 1513055-1513588 bp Feature: gene Location: 1513836-1514450 bp Feature: gene Location: 1527322-1527747 bp Ori: CCG44858.1 Gene: yckC2 Feature: domain Description: YckC Location: 1527337-1527730 bp Feature: domain Description: YckC Location: 1 527337-1 527730 bp Feature: gene Location: 1528227-1529153 bp Feature: gene Location: 1529919-1531766 bp Ori: CCG44860.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1530243-1530942 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 530243-1 530942 bp Feature: domain Description: HNHc Note: nucleases Location: 1531497-1531635 bp Feature: domain Description: HNHc Note: nucleases Location: 1 531 497-1 531 635 bp Feature: gene Location: 1531995-1532306 bp Feature: gene Location: 1532507-1533298 bp Ori: CCG44862.1 Feature: domain Description: PRK03140 Location: 1532510-1533278 bp Feature: domain Description: PRK031 40 Location: 1 53251 0-1 533278 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IlvB (COG0028), GAF (smart00065), PRK10060 (cyclic di-GMP phosphodiesterase), RVT-GII, HNHc (smart00507), FeuA (cd01138), FepD (COG0609), RDD (pfam06271), YdiL (COG1266), DUF2187 (pfam09953)
YaeI (COG1408), RVT-Retrons, PRK09291 (SDR family oxidoreductase), YckC (COG1714), PRK03140 (phosphatidylserine decarboxylase; Provisional)