myRT

myRT report for GCA_000292915.1_ASM29291v1

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Seq: CP003774.1 Burkholderia cepacia GG4 chromosome 1, complete sequence (3463655 bp)
Overview 1 RT 1: 707715-715070 bp Neighborhood of RT #1 [707715, 715087] lolB PEP_TPR_lipo PEP_TPR_lipo RVT_N RVT-GII GIIM HNHc PRK01103 MutY Feature: gene Location: 707715-708335 bp Ori: AFQ47089.1 Feature: domain Description: lolB Location: 707757-708333 bp Feature: domain Description: lolB Location: 707757-708333 bp Feature: gene Location: 708335-710158 bp Ori: AFQ47090.1 Feature: domain Description: PEP_TPR_lipo Location: 708578-709607 bp Feature: domain Description: PEP_TPR_lipo Location: 708578-709607 bp Feature: domain Description: PEP_TPR_lipo Location: 709625-710075 bp Feature: domain Description: PEP_TPR_lipo Location: 709625-71 0075 bp Feature: gene Location: 710265-711983 bp Ori: AFQ47091.1 Feature: domain Description: RVT_N Location: 710322-710559 bp Feature: domain Description: RVT_N Location: 71 0322-71 0559 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 710610-711258 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71 061 0-71 1 258 bp Feature: domain Description: GIIM Note: maturase Location: 711312-711543 bp Feature: domain Description: GIIM Note: maturase Location: 71 1 31 2-71 1 543 bp Feature: domain Description: HNHc Note: nucleases Location: 711786-711927 bp Feature: domain Description: HNHc Note: nucleases Location: 71 1 786-71 1 927 bp Feature: gene Location: 713116-713943 bp Ori: AFQ47092.1 Feature: domain Description: PRK01103 Location: 713119-713941 bp Feature: domain Description: PRK01 1 03 Location: 71 31 1 9-71 3941 bp Feature: gene Location: 713981-715087 bp Ori: AFQ47093.1 Feature: domain Description: MutY Location: 714032-715070 bp Feature: domain Description: MutY Location: 71 4032-71 5070 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT lolB (TIGR00548), PEP_TPR_lipo (TIGR02917), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PRK01103 (bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase), MutY (COG1194)