myRT

myRT report for GCA_000299135.1_ASM29913v1

Download annotations/find similar RTs

Seq: CP003810.1 Streptococcus agalactiae GD201008-001, complete genome (2063112 bp)
Overview 1 RT 1: 100736-105253 bp 2 RT 2: 519691-526716 bp 3 RT 3: 1989854-1995634 bp Neighborhood of RT #1 [100736, 105276] NTP_transf_6 DUF2992 RVT-GII GIIM PRK08295 PhoE Neighborhood of RT #2 [519691, 526721] murG FtsQ RVT-GII GIIM FtsA PRK09330 Neighborhood of RT #3 [1989854, 1995642] rpmF rpmG RVT-GII GIIM Surf_Exclu_PgrA Surf_Exclu_PgrA Surf_Exclu_PgrA LPXTG_anchor Feature: gene Location: 100736-101287 bp Ori: AFS44896.1 Feature: domain Description: NTP_transf_6 Location: 100796-101276 bp Feature: domain Description: NTP_transf_6 Location: 1 00796-1 01 276 bp Feature: gene Location: 101507-101926 bp Ori: AFS44897.1 Feature: domain Description: DUF2992 Location: 101516-101924 bp Feature: domain Description: DUF2992 Location: 1 01 51 6-1 01 924 bp Feature: gene Location: 102457-103767 bp Ori: AFS44898.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102694-103309 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 02694-1 03309 bp Feature: domain Description: GIIM Note: maturase Location: 103363-103579 bp Feature: domain Description: GIIM Note: maturase Location: 1 03363-1 03579 bp Feature: gene Location: 103983-104462 bp Ori: AFS44899.1 Feature: domain Description: PRK08295 Location: 103998-104223 bp Feature: domain Description: PRK08295 Location: 1 03998-1 04223 bp Feature: gene Location: 104584-105276 bp Ori: AFS44900.1 Gene: gpmB Feature: domain Description: PhoE Location: 104593-105253 bp Feature: domain Description: PhoE Location: 1 04593-1 05253 bp Feature: gene Location: 519691-520767 bp Ori: AFS45295.1 Gene: murG Feature: domain Description: murG Location: 519700-520735 bp Feature: domain Description: murG Location: 51 9700-520735 bp Feature: gene Location: 520771-521898 bp Ori: AFS45296.1 Gene: ftsQ Feature: domain Description: FtsQ Location: 521017-521731 bp Feature: domain Description: FtsQ Location: 521 01 7-521 731 bp Feature: gene Location: 522435-523745 bp Ori: AFS45297.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 522672-523287 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 522672-523287 bp Feature: domain Description: GIIM Note: maturase Location: 523341-523557 bp Feature: domain Description: GIIM Note: maturase Location: 523341 -523557 bp Feature: gene Location: 524046-525419 bp Ori: AFS45298.1 Gene: ftsA Feature: domain Description: FtsA Location: 524049-525414 bp Feature: domain Description: FtsA Location: 524049-52541 4 bp Feature: gene Location: 525441-526721 bp Ori: AFS45299.1 Gene: ftsZ Feature: domain Description: PRK09330 Location: 525453-526716 bp Feature: domain Description: PRK09330 Location: 525453-52671 6 bp Feature: gene Location: 1989854-1990036 bp Ori: AFS46705.1 Gene: rpmF Feature: domain Description: rpmF Location: 1989857-1990019 bp Feature: domain Description: rpmF Location: 1 989857-1 99001 9 bp Feature: gene Location: 1990052-1990201 bp Ori: AFS46706.1 Gene: rpmG Feature: domain Description: rpmG Location: 1990055-1990199 bp Feature: domain Description: rpmG Location: 1 990055-1 9901 99 bp Feature: gene Location: 1990501-1991811 bp Ori: AFS46707.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1990738-1991353 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 990738-1 991 353 bp Feature: domain Description: GIIM Note: maturase Location: 1991407-1991623 bp Feature: domain Description: GIIM Note: maturase Location: 1 991 407-1 991 623 bp Feature: gene Location: 1992339-1992800 bp Feature: gene Location: 1992805-1995642 bp Ori: AFS46709.1 Feature: domain Description: Surf_Exclu_PgrA Location: 1992907-1993282 bp Feature: domain Description: Surf_Exclu_PgrA Location: 1 992907-1 993282 bp Feature: domain Description: Surf_Exclu_PgrA Location: 1993384-1993687 bp Feature: domain Description: Surf_Exclu_PgrA Location: 1 993384-1 993687 bp Feature: domain Description: Surf_Exclu_PgrA Location: 1993759-1994968 bp Feature: domain Description: Surf_Exclu_PgrA Location: 1 993759-1 994968 bp Feature: domain Description: LPXTG_anchor Location: 1995541-1995634 bp Feature: domain Description: LPXTG_anchor Location: 1 995541 -1 995634 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTP_transf_6 (pfam06042), DUF2992 (pfam11208), RVT-GII, GIIM (pfam08388), PRK08295 (RNA polymerase sporulation sigma factor SigH), PhoE (COG0406), murG (TIGR01133), FtsQ (pfam03799), FtsA (smart00842), PRK09330 (cell division protein FtsZ; Validated)
rpmF (PRK12286), rpmG (PRK00595), Surf_Exclu_PgrA (TIGR04320), LPXTG_anchor (TIGR01167)