myRT

myRT report for GCA_000300095.1_ASM30009v1

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Seq: CP003865.1 Paraburkholderia phenoliruptrix BR3459a plasmid pSYMBR3459, complete sequence (785419 bp)
Overview 1 RT 1: 654125-657520 bp Neighborhood of RT #1 [654125, 657543] CitB DUF772 IS5 RVT-GII DUF772 Feature: gene Location: 654125-654490 bp Ori: AFT90535.1 Feature: domain Description: CitB Location: 654131-654455 bp Feature: domain Description: CitB Location: 6541 31 -654455 bp Feature: gene Location: 654697-655431 bp Ori: AFT90536.1 Feature: domain Description: DUF772 Location: 654790-654877 bp Feature: domain Description: DUF772 Location: 654790-654877 bp Feature: domain Description: IS5 Location: 655174-655399 bp Feature: domain Description: IS5 Location: 6551 74-655399 bp Feature: gene Location: 655424-656917 bp Ori: AFT90537.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 655835-656525 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 655835-656525 bp Feature: gene Location: 656914-657126 bp Feature: gene Location: 657253-657543 bp Ori: AFT90539.1 Feature: domain Description: DUF772 Location: 657409-657520 bp Feature: domain Description: DUF772 Location: 657409-657520 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CitB (TIGR02484), DUF772 (pfam05598), IS5 (COG3039), RVT-GII

Seq: CP003864.1 Paraburkholderia phenoliruptrix BR3459a chromosome 2, complete sequence (2713495 bp)
Overview 1 RT 1: 1234571-1243264 bp Neighborhood of RT #1 [1234571, 1243264] TPR TPR TPR GT9_LPS_heptosyltransferase RVT-UG8 RVT-UG3 RutF Feature: gene Location: 1234571-1236547 bp Ori: AFT88698.1 Feature: domain Description: TPR Location: 1234829-1235039 bp Feature: domain Description: TPR Location: 12 3482 9-12 35039 bp Feature: domain Description: TPR Location: 1235060-1235318 bp Feature: domain Description: TPR Location: 12 35060-12 35318 bp Feature: domain Description: TPR Location: 1235369-1235621 bp Feature: domain Description: TPR Location: 12 35369-12 3562 1 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1235732-1236455 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 12 35732 -12 36455 bp Feature: gene Location: 1236599-1237075 bp Feature: gene Location: 1237826-1239262 bp Ori: AFT88700.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1237832-1238267 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 12 37832 -12 382 67 bp Feature: gene Location: 1239924-1241075 bp Ori: AFT88701.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1240233-1240722 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 12 402 33-12 4072 2 bp Feature: gene Location: 1242203-1242739 bp Ori: AFT88702.1 Feature: domain Description: RutF Location: 1242206-1242614 bp Feature: domain Description: RutF Location: 12 42 2 06-12 42 614 bp Feature: gene Location: 1242869-1243264 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TPR (smart00028), GT9_LPS_heptosyltransferase (cd03789), RVT-UG8, RVT-UG3, RutF (TIGR03615)