myRT

myRT report for GCA_000300175.1_ASM30017v1

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Seq: CP003874.1 Alteromonas macleodii str. 'Balearic Sea AD45' plasmid pAMBAS45, complete sequence (45406 bp)
Overview 1 RT 1: 23381-26940 bp Neighborhood of RT #1 [23381, 27398] RVT-DGRs Avd_like pfam03781 Feature: gene Location: 23381-24112 bp Feature: gene Location: 24185-24481 bp Feature: gene Location: 24483-25751 bp Ori: AFT97430.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 24924-25608 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 24924-25608 bp Feature: gene Location: 25748-26101 bp Ori: AFT97431.1 Feature: domain Description: Avd_like Location: 25772-26072 bp Feature: domain Description: Avd_like Location: 25772-26072 bp Feature: gene Location: 26169-27398 bp Ori: AFT97432.1 Feature: domain Description: pfam03781 Location: 26604-26940 bp Feature: domain Description: pfam03781 Location: 26604-26940 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376), pfam03781 (FGE-sulfatase;Sulfatase-modifying factor enzyme 1)

Seq: CP003873.1 Alteromonas macleodii str. 'Balearic Sea AD45', complete genome (4629479 bp)
Overview 1 RT 1: 7116-11996 bp 2 RT 2: 1322980-1328387 bp 3 RT 3: 3358062-3366436 bp 4 RT 4: 4240345-4245736 bp 5 RT 5: 4297263-4302156 bp 6 RT 6: 4466421-4471920 bp Neighborhood of RT #1 [7116, 12007] RVT-GII GIIM E_set_pullulanase_like glyS Neighborhood of RT #2 [1322980, 1328464] lysS RVT-GII GIIM PRK06522 RluA-like Neighborhood of RT #3 [3358062, 3366447] CoxS CoxL CoxL RVT-GII GIIM PRK05367 Neighborhood of RT #4 [4240345, 4245741] AmyAc_Amylosucrase Malt_amylase_C Cys_rich_CPXG RVT-GII GIIM folE Neighborhood of RT #5 [4297263, 4302578] PRK08840 RVT-GII GIIM YvlB Neighborhood of RT #6 [4466421, 4471920] accC RVT-GII GIIM Feature: gene Location: 7116-7352 bp Feature: gene Location: 7489-7695 bp Feature: gene Location: 7922-9193 bp Ori: AFT93497.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8135-8756 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8135-8756 bp Feature: domain Description: GIIM Note: maturase Location: 8804-9023 bp Feature: domain Description: GIIM Note: maturase Location: 8804-902 3 bp Feature: gene Location: 9401-9904 bp Ori: AFT93498.1 Feature: domain Description: E_set_pullulanase_like Location: 9554-9824 bp Feature: domain Description: E_set_pullulanase_like Location: 9554-982 4 bp Feature: gene Location: 9929-12007 bp Ori: AFT93499.1 Gene: glyS Feature: domain Description: glyS Location: 9938-11996 bp Feature: domain Description: glyS Location: 9938-11996 bp Feature: gene Location: 1322980-1324548 bp Ori: AFT94611.1 Gene: lysS Feature: domain Description: lysS Location: 1323007-1324510 bp Feature: domain Description: lysS Location: 132 3007-132 4510 bp Feature: gene Location: 1324958-1325164 bp Feature: gene Location: 1325392-1326663 bp Ori: AFT94613.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1325605-1326226 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 132 5605-132 62 2 6 bp Feature: domain Description: GIIM Note: maturase Location: 1326274-1326493 bp Feature: domain Description: GIIM Note: maturase Location: 132 62 74-132 6493 bp Feature: gene Location: 1326651-1327619 bp Ori: AFT94614.1 Feature: domain Description: PRK06522 Location: 1326663-1327539 bp Feature: domain Description: PRK0652 2 Location: 132 6663-132 7539 bp Feature: gene Location: 1327712-1328464 bp Ori: AFT94615.1 Feature: domain Description: RluA-like Location: 1327727-1328387 bp Feature: domain Description: RluA-like Location: 132 772 7-132 8387 bp Feature: gene Location: 3358062-3358535 bp Ori: AFT96331.1 Feature: domain Description: CoxS Location: 3358071-3358518 bp Feature: domain Description: CoxS Location: 3358071-3358518 bp Feature: gene Location: 3358539-3360860 bp Ori: AFT96332.1 Feature: domain Description: CoxL Location: 3358731-3359562 bp Feature: domain Description: CoxL Location: 3358731-3359562 bp Feature: domain Description: CoxL Location: 3359661-3360840 bp Feature: domain Description: CoxL Location: 3359661-3360840 bp Feature: gene Location: 3361459-3362313 bp Ori: AFT96333.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3361462-3361876 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3361462 -3361876 bp Feature: domain Description: GIIM Note: maturase Location: 3361924-3362143 bp Feature: domain Description: GIIM Note: maturase Location: 336192 4-3362 143 bp Feature: gene Location: 3362958-3363164 bp Feature: gene Location: 3363538-3366447 bp Ori: AFT96335.1 Feature: domain Description: PRK05367 Location: 3363568-3366436 bp Feature: domain Description: PRK05367 Location: 3363568-3366436 bp Feature: gene Location: 4240345-4242294 bp Ori: AFT97064.1 Feature: domain Description: AmyAc_Amylosucrase Location: 4240429-4242040 bp Feature: domain Description: AmyAc_Amylosucrase Location: 42 4042 9-42 42 040 bp Feature: domain Description: Malt_amylase_C Location: 4242058-4242280 bp Feature: domain Description: Malt_amylase_C Location: 42 42 058-42 42 2 80 bp Feature: gene Location: 4242618-4242860 bp Ori: AFT97065.1 Feature: domain Description: Cys_rich_CPXG Location: 4242678-4242789 bp Feature: domain Description: Cys_rich_CPXG Location: 42 42 678-42 42 789 bp Feature: gene Location: 4242977-4244248 bp Ori: AFT97066.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4243190-4243811 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 43190-42 43811 bp Feature: domain Description: GIIM Note: maturase Location: 4243859-4244078 bp Feature: domain Description: GIIM Note: maturase Location: 42 43859-42 44078 bp Feature: gene Location: 4244475-4244681 bp Feature: gene Location: 4245058-4245741 bp Ori: AFT97068.1 Gene: folE Feature: domain Description: folE Location: 4245211-4245736 bp Feature: domain Description: folE Location: 42 452 11-42 45736 bp Feature: gene Location: 4297263-4298648 bp Ori: AFT97116.1 Feature: domain Description: PRK08840 Location: 4297281-4298643 bp Feature: domain Description: PRK08840 Location: 42 972 81-42 98643 bp Feature: gene Location: 4298764-4299234 bp Feature: gene Location: 4299455-4300726 bp Ori: AFT97118.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4299668-4300289 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 99668-43002 89 bp Feature: domain Description: GIIM Note: maturase Location: 4300337-4300556 bp Feature: domain Description: GIIM Note: maturase Location: 4300337-4300556 bp Feature: gene Location: 4300953-4301159 bp Feature: gene Location: 4301577-4302578 bp Ori: AFT97120.1 Feature: domain Description: YvlB Location: 4301985-4302156 bp Feature: domain Description: YvlB Location: 4301985-4302 156 bp Feature: gene Location: 4466421-4467764 bp Ori: AFT97257.1 Feature: domain Description: accC Location: 4466424-4467756 bp Feature: domain Description: accC Location: 446642 4-4467756 bp Feature: gene Location: 4468212-4469141 bp Feature: gene Location: 4469248-4470519 bp Ori: AFT97259.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4469461-4470082 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4469461-4470082 bp Feature: domain Description: GIIM Note: maturase Location: 4470130-4470349 bp Feature: domain Description: GIIM Note: maturase Location: 4470130-4470349 bp Feature: gene Location: 4470746-4470952 bp Feature: gene Location: 4471480-4471920 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), E_set_pullulanase_like (cd02861), glyS (TIGR00211), lysS (PRK02983), PRK06522 (2-dehydropantoate 2-reductase; Reviewed), RluA-like (TIGR01621), CoxS (COG2080), CoxL (COG1529), PRK05367 (aminomethyl-transferring glycine dehydrogenase)
AmyAc_Amylosucrase (cd11324), Malt_amylase_C (pfam16657), Cys_rich_CPXG (pfam14255), folE (TIGR00063), PRK08840 (replicative DNA helicase; Provisional), YvlB (COG3595), accC (TIGR00514)