myRT

myRT report for GCA_000300475.1_ASM30047v1

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Seq: CP003693.1 Bacillus thuringiensis MC28 plasmid pMC319, complete sequence (319710 bp)
Overview 1 RT 1: 8264-14836 bp Neighborhood of RT #1 [8264, 14836] Lysozyme_like Spr TraC-F-type RVT-GII HNHc Feature: gene Location: 8264-9391 bp Ori: AFU17454.1 Feature: domain Description: Lysozyme_like Location: 8453-8945 bp Feature: domain Description: Lysozyme_like Location: 8453-8945 bp Feature: domain Description: Spr Location: 8993-9368 bp Feature: domain Description: Spr Location: 8993-9368 bp Feature: gene Location: 9396-10868 bp Ori: AFU17455.1 Feature: domain Description: TraC-F-type Location: 9648-10773 bp Feature: domain Description: TraC-F-type Location: 9648-1 0773 bp Feature: gene Location: 10916-12712 bp Ori: AFU17456.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11174-11879 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 1 74-1 1 879 bp Feature: domain Description: HNHc Note: nucleases Location: 12443-12575 bp Feature: domain Description: HNHc Note: nucleases Location: 1 2443-1 2575 bp Feature: gene Location: 13484-14011 bp Feature: gene Location: 14027-14836 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Lysozyme_like (pfam13702), Spr (COG0791), TraC-F-type (TIGR02746), RVT-GII, HNHc (smart00507)

Seq: CP003692.1 Bacillus thuringiensis MC28 plasmid pMC189, complete sequence (189702 bp)
Overview 1 RT 1: 112657-116314 bp 2 RT 2: 169069-176337 bp 3 RT 3: 183167-188877 bp Neighborhood of RT #1 [112657, 116314] DUF4879 RVT-GII HNHc Neighborhood of RT #2 [169069, 176345] COG1787 zf-C4_Topoisom RVT-GII Intron_maturas2 HNHc DUF3991 Toprim_2 PRK07726 PRK08173 Toprim_Crpt Neighborhood of RT #3 [183167, 188877] Lysozyme_like Spr TraC-F-type RVT-GII HNHc Feature: gene Location: 112657-113082 bp Ori: AFU17365.1 Feature: domain Description: DUF4879 Location: 112747-113077 bp Feature: domain Description: DUF4879 Location: 112 747-113077 bp Feature: gene Location: 113187-113585 bp Feature: gene Location: 113633-115429 bp Ori: AFU17367.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 113891-114596 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 113891-114596 bp Feature: domain Description: HNHc Note: nucleases Location: 115160-115292 bp Feature: domain Description: HNHc Note: nucleases Location: 115160-1152 92 bp Feature: gene Location: 115592-115822 bp Feature: gene Location: 116201-116314 bp Feature: gene Location: 169069-169221 bp Feature: gene Location: 169435-169890 bp Ori: AFU17427.1 Feature: domain Description: COG1787 Location: 169441-169717 bp Feature: domain Description: COG1787 Location: 169441-169717 bp Feature: domain Description: zf-C4_Topoisom Location: 169774-169885 bp Feature: domain Description: zf-C4_Topoisom Location: 169774-169885 bp Feature: gene Location: 170015-171850 bp Ori: AFU17428.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 170300-171134 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 170300-171134 bp Feature: domain Description: Intron_maturas2 Location: 171212-171548 bp Feature: domain Description: Intron_maturas2 Location: 1712 12 -171548 bp Feature: domain Description: HNHc Note: nucleases Location: 171644-171824 bp Feature: domain Description: HNHc Note: nucleases Location: 171644-17182 4 bp Feature: gene Location: 172613-173590 bp Ori: AFU17429.1 Feature: domain Description: DUF3991 Location: 172976-173177 bp Feature: domain Description: DUF3991 Location: 172 976-173177 bp Feature: domain Description: Toprim_2 Location: 173240-173501 bp Feature: domain Description: Toprim_2 Location: 1732 40-173501 bp Feature: gene Location: 173688-176345 bp Ori: AFU17430.1 Feature: domain Description: PRK07726 Location: 173697-175671 bp Feature: domain Description: PRK0772 6 Location: 173697-175671 bp Feature: domain Description: PRK08173 Location: 175800-176076 bp Feature: domain Description: PRK08173 Location: 175800-176076 bp Feature: domain Description: Toprim_Crpt Location: 176157-176337 bp Feature: domain Description: Toprim_Crpt Location: 176157-176337 bp Feature: gene Location: 183167-184258 bp Ori: AFU17439.1 Feature: domain Description: Lysozyme_like Location: 183356-183848 bp Feature: domain Description: Lysozyme_like Location: 183356-183848 bp Feature: domain Description: Spr Location: 183896-184256 bp Feature: domain Description: Spr Location: 183896-1842 56 bp Feature: gene Location: 184263-185723 bp Ori: AFU17440.1 Feature: domain Description: TraC-F-type Location: 184503-185628 bp Feature: domain Description: TraC-F-type Location: 184503-18562 8 bp Feature: gene Location: 185782-187578 bp Ori: AFU17441.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 186040-186745 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 186040-186745 bp Feature: domain Description: HNHc Note: nucleases Location: 187309-187441 bp Feature: domain Description: HNHc Note: nucleases Location: 187309-187441 bp Feature: gene Location: 187741-187971 bp Feature: gene Location: 188350-188877 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4879 (pfam16219), RVT-GII, HNHc (smart00507), COG1787 (Endonuclease, HJR/Mrr/RecB family ), zf-C4_Topoisom (pfam01396), Intron_maturas2 (pfam01348), DUF3991 (pfam13154), Toprim_2 (pfam13155), PRK07726 (DNA topoisomerase 3), PRK08173 (DNA topoisomerase III; Validated)
Toprim_Crpt (pfam13342), Lysozyme_like (pfam13702), Spr (COG0791), TraC-F-type (TIGR02746)

Seq: CP003691.1 Bacillus thuringiensis MC28 plasmid pMC183, complete sequence (183210 bp)
Overview 1 RT 1: 20130-25851 bp 2 RT 2: 101541-107840 bp Neighborhood of RT #1 [20130, 25851] TraC-F-type TraC-F-type Lysozyme_like RVT-GII HNHc Lysozyme_like Spr Neighborhood of RT #2 [101541, 107863] TraC-F-type TraC-F-type Lysozyme_like RVT-GII HNHc Lysozyme_like Spr TcpC_N Feature: gene Location: 20130-22067 bp Ori: AFU17073.1 Feature: domain Description: TraC-F-type Location: 20799-21036 bp Feature: domain Description: TraC-F-type Location: 20799-2103 6 bp Feature: domain Description: TraC-F-type Location: 21444-21969 bp Feature: domain Description: TraC-F-type Location: 21444-21969 bp Feature: gene Location: 22069-22491 bp Ori: AFU17074.1 Feature: domain Description: Lysozyme_like Location: 22300-22468 bp Feature: domain Description: Lysozyme_like Location: 223 00-22468 bp Feature: gene Location: 23108-24949 bp Ori: AFU17075.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23438-24134 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23 43 8-2413 4 bp Feature: domain Description: HNHc Note: nucleases Location: 24695-24833 bp Feature: domain Description: HNHc Note: nucleases Location: 24695-2483 3 bp Feature: gene Location: 25064-25663 bp Ori: AFU17076.1 Feature: domain Description: Lysozyme_like Location: 25067-25403 bp Feature: domain Description: Lysozyme_like Location: 25067-25403 bp Feature: domain Description: Spr Location: 25415-25592 bp Feature: domain Description: Spr Location: 25415-25592 bp Feature: gene Location: 25738-25851 bp Feature: gene Location: 101541-103478 bp Ori: AFU17173.1 Feature: domain Description: TraC-F-type Location: 101760-102447 bp Feature: domain Description: TraC-F-type Location: 101760-102447 bp Feature: domain Description: TraC-F-type Location: 102855-103380 bp Feature: domain Description: TraC-F-type Location: 102855-103 3 80 bp Feature: gene Location: 103480-103902 bp Ori: AFU17174.1 Feature: domain Description: Lysozyme_like Location: 103711-103879 bp Feature: domain Description: Lysozyme_like Location: 103 711-103 879 bp Feature: gene Location: 104519-106360 bp Ori: AFU17175.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 104849-105545 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 104849-105545 bp Feature: domain Description: HNHc Note: nucleases Location: 106106-106244 bp Feature: domain Description: HNHc Note: nucleases Location: 106106-106244 bp Feature: gene Location: 106475-107233 bp Ori: AFU17176.1 Feature: domain Description: Lysozyme_like Location: 106478-106814 bp Feature: domain Description: Lysozyme_like Location: 106478-106814 bp Feature: domain Description: Spr Location: 106844-107216 bp Feature: domain Description: Spr Location: 106844-107216 bp Feature: gene Location: 107240-107863 bp Ori: AFU17177.1 Feature: domain Description: TcpC_N Location: 107498-107840 bp Feature: domain Description: TcpC_N Location: 107498-107840 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraC-F-type (TIGR02746), Lysozyme_like (pfam13702), RVT-GII, HNHc (smart00507), Spr (COG0791), TcpC_N (cd16386)