myRT

myRT report for GCA_000305935.1_ASM30593v1

Download annotations/find similar RTs

Seq: CP003732.1 Thermacetogenium phaeum DSM 12270, complete genome (2939057 bp)
Overview 1 RT 1: 485398-489946 bp 2 RT 2: 1073261-1076360 bp 3 RT 3: 1192787-1199932 bp Neighborhood of RT #1 [485398, 489951] AmpS WrbA RVT-GII MFS_ExuT_GudP_like IclR Neighborhood of RT #2 [1073261, 1076389] RVT-GII GIIM COG1578 Neighborhood of RT #3 [1192787, 1199982] COG3552 COG3552 SapB RVT-GII GIIM COG5421 PLN02643 Feature: gene Location: 485398-486609 bp Ori: AFV10712.1 Feature: domain Description: AmpS Location: 485506-486583 bp Feature: domain Description: AmpS Location: 485506-486583 bp Feature: gene Location: 486948-487496 bp Ori: AFV10713.1 Feature: domain Description: WrbA Location: 486951-487332 bp Feature: domain Description: WrbA Location: 486951 -487332 bp Feature: gene Location: 487493-487669 bp Ori: AFV10714.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 487508-487607 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 487508-487607 bp Feature: gene Location: 487659-488945 bp Ori: AFV10715.1 Feature: domain Description: MFS_ExuT_GudP_like Location: 487704-488895 bp Feature: domain Description: MFS_ExuT_GudP_like Location: 487704-488895 bp Feature: gene Location: 489181-489951 bp Ori: AFV10716.1 Gene: yagI Feature: domain Description: IclR Location: 489211-489946 bp Feature: domain Description: IclR Location: 48921 1 -489946 bp Feature: gene Location: 1073261-1074673 bp Ori: AFV11267.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1073606-1074221 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 073606-1 074221 bp Feature: domain Description: GIIM Note: maturase Location: 1074281-1074506 bp Feature: domain Description: GIIM Note: maturase Location: 1 074281 -1 074506 bp Feature: gene Location: 1075067-1075615 bp Feature: gene Location: 1075907-1076389 bp Ori: AFV11269.1 Feature: domain Description: COG1578 Location: 1075910-1076360 bp Feature: domain Description: COG1 578 Location: 1 07591 0-1 076360 bp Feature: gene Location: 1192787-1194187 bp Ori: AFV11396.1 Feature: domain Description: COG3552 Location: 1192793-1193054 bp Feature: domain Description: COG3552 Location: 1 1 92793-1 1 93054 bp Feature: domain Description: COG3552 Location: 1193459-1194176 bp Feature: domain Description: COG3552 Location: 1 1 93459-1 1 941 76 bp Feature: gene Location: 1194310-1194777 bp Ori: AFV11397.1 Feature: domain Description: SapB Location: 1194322-1194724 bp Feature: domain Description: SapB Location: 1 1 94322-1 1 94724 bp Feature: gene Location: 1195105-1196409 bp Ori: AFV11398.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1195405-1196053 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 95405-1 1 96053 bp Feature: domain Description: GIIM Note: maturase Location: 1196116-1196323 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 961 1 6-1 1 96323 bp Feature: gene Location: 1196987-1198687 bp Ori: AFV11399.1 Feature: domain Description: COG5421 Location: 1197143-1198460 bp Feature: domain Description: COG5421 Location: 1 1 971 43-1 1 98460 bp Feature: gene Location: 1198942-1199982 bp Ori: AFV11400.1 Gene: galT Feature: domain Description: PLN02643 Location: 1198945-1199932 bp Feature: domain Description: PLN02643 Location: 1 1 98945-1 1 99932 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AmpS (COG2309), WrbA (COG0655), RVT-GII, MFS_ExuT_GudP_like (cd17319), IclR (pfam01614), GIIM (pfam08388), COG1578 (Uncharacterized conserved protein, contains ATP-grasp and redox domains ), COG3552 (CoxE;Uncharacterized conserved protein, contains von Willebrand factor type A (vWA) domain ), SapB (smart00741), COG5421 (Transposase )
PLN02643 (ADP-glucose phosphorylase)