myRT

myRT report for GCA_000306745.1_ASM30674v1

Download annotations/find similar RTs

Seq: CP003889.1 Bacillus thuringiensis Bt407, complete genome (5500501 bp)
Overview 1 RT 1: 626996-632709 bp 2 RT 2: 1034103-1039397 bp 3 RT 3: 3971716-3977340 bp Neighborhood of RT #1 [626996, 632747] Methyltransf_25 gly_Cac_T_rel RVT-GII HNHc gly_Cac_T_rel TDH_SDR_e Neighborhood of RT #2 [1034103, 1039477] RVT-GII HNHc ETR_like Ntn_PVA Neighborhood of RT #3 [3971716, 3977396] PHA02517 amiF RVT-GII HNHc amiF caa3_CtaG Feature: gene Location: 626996-627727 bp Ori: AFV16350.1 Gene: uBIE1 Feature: domain Description: Methyltransf_25 Location: 627143-627416 bp Feature: domain Description: Methyltransf_25 Location: 6271 43-62741 6 bp Feature: gene Location: 627941-628786 bp Ori: AFV16351.1 Feature: domain Description: gly_Cac_T_rel Location: 627971-628781 bp Feature: domain Description: gly_Cac_T_rel Location: 627971 -628781 bp Feature: gene Location: 628880-630685 bp Ori: AFV16352.1 Gene: ltrA1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 629174-629870 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6291 74-629870 bp Feature: domain Description: HNHc Note: nucleases Location: 630431-630569 bp Feature: domain Description: HNHc Note: nucleases Location: 630431 -630569 bp Feature: gene Location: 631399-631737 bp Ori: AFV16353.1 Feature: domain Description: gly_Cac_T_rel Location: 631405-631735 bp Feature: domain Description: gly_Cac_T_rel Location: 631 405-631 735 bp Feature: gene Location: 631782-632747 bp Ori: AFV16354.1 Feature: domain Description: TDH_SDR_e Location: 631791-632709 bp Feature: domain Description: TDH_SDR_e Location: 631 791 -632709 bp Feature: gene Location: 1034103-1034249 bp Feature: gene Location: 1034346-1034651 bp Feature: gene Location: 1034879-1036684 bp Ori: AFV16763.1 Gene: ltrA2 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1035173-1035869 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0351 73-1 035869 bp Feature: domain Description: HNHc Note: nucleases Location: 1036430-1036568 bp Feature: domain Description: HNHc Note: nucleases Location: 1 036430-1 036568 bp Feature: gene Location: 1037358-1038341 bp Ori: AFV16764.1 Gene: ppsC Feature: domain Description: ETR_like Location: 1037379-1038315 bp Feature: domain Description: ETR_like Location: 1 037379-1 03831 5 bp Feature: gene Location: 1038491-1039477 bp Ori: AFV16765.1 Feature: domain Description: Ntn_PVA Location: 1038497-1039397 bp Feature: domain Description: Ntn_PVA Location: 1 038497-1 039397 bp Feature: gene Location: 3971716-3972513 bp Ori: AFV19751.1 Gene: insK5 Feature: domain Description: PHA02517 Location: 3971734-3972502 bp Feature: domain Description: PHA0251 7 Location: 3971 734-3972502 bp Feature: gene Location: 3972579-3973202 bp Ori: AFV19752.1 Gene: amiF1 Feature: domain Description: amiF Location: 3972582-3973197 bp Feature: domain Description: amiF Location: 3972582-39731 97 bp Feature: gene Location: 3973319-3975151 bp Ori: AFV19753.1 Gene: ltrA3 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3973619-3974324 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 397361 9-3974324 bp Feature: domain Description: HNHc Note: nucleases Location: 3974903-3975035 bp Feature: domain Description: HNHc Note: nucleases Location: 3974903-3975035 bp Feature: gene Location: 3975867-3976256 bp Ori: AFV19754.1 Gene: amiF2 Feature: domain Description: amiF Location: 3975870-3976242 bp Feature: domain Description: amiF Location: 3975870-3976242 bp Feature: gene Location: 3976491-3977396 bp Ori: AFV19755.1 Gene: ctaG Feature: domain Description: caa3_CtaG Location: 3976500-3977340 bp Feature: domain Description: caa3_CtaG Location: 3976500-3977340 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Methyltransf_25 (pfam13649), gly_Cac_T_rel (TIGR01825), RVT-GII, HNHc (smart00507), TDH_SDR_e (cd05272), ETR_like (cd05282), Ntn_PVA (cd00542), PHA02517 (putative transposase OrfB; Reviewed), amiF (PRK13287), caa3_CtaG (TIGR02737)

Seq: CP003891.1 Bacillus thuringiensis Bt407 plasmid BTB_78p, complete sequence (77895 bp)
Overview 1 RT 1: 46342-51361 bp Neighborhood of RT #1 [46342, 51361] T4SS-DNA_transf RVT-GII HNHc SXT_TraD Feature: gene Location: 46342-46722 bp Feature: gene Location: 46735-48060 bp Ori: AFV22134.1 Feature: domain Description: T4SS-DNA_transf Location: 46741-47785 bp Feature: domain Description: T4SS-DNA_transf Location: 46741-47785 bp Feature: gene Location: 48228-50060 bp Ori: AFV22135.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48528-49233 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4852 8-492 33 bp Feature: domain Description: HNHc Note: nucleases Location: 49812-49944 bp Feature: domain Description: HNHc Note: nucleases Location: 49812 -49944 bp Feature: gene Location: 50776-51099 bp Ori: AFV22136.1 Feature: domain Description: SXT_TraD Location: 50887-51085 bp Feature: domain Description: SXT_TraD Location: 50887-51085 bp Feature: gene Location: 51041-51361 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT T4SS-DNA_transf (pfam02534), RVT-GII, HNHc (smart00507), SXT_TraD (TIGR03743)