myRT

myRT report for GCA_000306845.1_ASM30684v1

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Seq: FQ958211.1 Legionella pneumophila subsp. pneumophila str. HL06041035 chromosome, complete genome (3492535 bp)
Overview 1 RT 1: 228638-233559 bp 2 RT 2: 899779-904899 bp 3 RT 3: 1137317-1142770 bp 4 RT 4: 1237673-1241329 bp Neighborhood of RT #1 [228638, 233559] MATE_MurJ_like InsE RVT-GII GIIM PHA02517 Neighborhood of RT #2 [899779, 904988] Methyltransf_31 InsE RVT-GII GIIM PHA02517 YhhI YhhI YhhI Neighborhood of RT #3 [1137317, 1142770] Phage_int_SAM_2 RVT-Retrons Trypsin_2 conj_TOL_TraD Neighborhood of RT #4 [1237673, 1241355] PHA02517 PHA02517 RVT-GII GIIM InsE PHA02517 Feature: gene Location: 228638-230266 bp Ori: CCD07468.1 Feature: domain Description: MATE_MurJ_like Location: 228689-229958 bp Feature: domain Description: MATE_MurJ_like Location: 228689-229958 bp Feature: gene Location: 230317-230610 bp Ori: CCD07469.1 Feature: domain Description: InsE Location: 230329-230590 bp Feature: domain Description: InsE Location: 230329-230590 bp Feature: gene Location: 231141-232385 bp Ori: CCD07470.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 231345-232002 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 231 345-232002 bp Feature: domain Description: GIIM Note: maturase Location: 232083-232299 bp Feature: domain Description: GIIM Note: maturase Location: 232083-232299 bp Feature: gene Location: 232422-233360 bp Ori: CCD07471.1 Feature: domain Description: PHA02517 Location: 232548-233334 bp Feature: domain Description: PHA0251 7 Location: 232548-233334 bp Feature: gene Location: 233380-233559 bp Feature: gene Location: 899779-900498 bp Ori: CCD08095.1 Feature: domain Description: Methyltransf_31 Location: 899896-900256 bp Feature: domain Description: Methyltransf_31 Location: 899896-900256 bp Feature: gene Location: 900714-901007 bp Ori: CCD08096.1 Feature: domain Description: InsE Location: 900726-900987 bp Feature: domain Description: InsE Location: 900726-900987 bp Feature: gene Location: 901538-902782 bp Ori: CCD08097.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 901742-902399 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 901 742-902399 bp Feature: domain Description: GIIM Note: maturase Location: 902480-902696 bp Feature: domain Description: GIIM Note: maturase Location: 902480-902696 bp Feature: gene Location: 902819-903757 bp Ori: CCD08098.1 Feature: domain Description: PHA02517 Location: 902945-903731 bp Feature: domain Description: PHA0251 7 Location: 902945-903731 bp Feature: gene Location: 903867-904988 bp Ori: CCD08099.1 Feature: domain Description: YhhI Location: 903894-904209 bp Feature: domain Description: YhhI Location: 903894-904209 bp Feature: domain Description: YhhI Location: 904284-904575 bp Feature: domain Description: YhhI Location: 904284-904575 bp Feature: domain Description: YhhI Location: 904644-904899 bp Feature: domain Description: YhhI Location: 904644-904899 bp Feature: gene Location: 1137317-1138123 bp Ori: CCD08310.1 Feature: domain Description: Phage_int_SAM_2 Location: 1137368-1137575 bp Feature: domain Description: Phage_int_SAM_2 Location: 1 1 37368-1 1 37575 bp Feature: gene Location: 1138147-1138374 bp Feature: gene Location: 1138703-1140328 bp Ori: CCD08312.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1138832-1139435 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 38832-1 1 39435 bp Feature: domain Description: Trypsin_2 Location: 1139819-1140239 bp Feature: domain Description: Trypsin_2 Location: 1 1 3981 9-1 1 40239 bp Feature: gene Location: 1140510-1142444 bp Ori: CCD08313.1 Feature: domain Description: conj_TOL_TraD Location: 1140528-1142436 bp Feature: domain Description: conj_TOL_TraD Location: 1 1 40528-1 1 42436 bp Feature: gene Location: 1142441-1142770 bp Feature: gene Location: 1237673-1238053 bp Feature: domain Description: PHA02517 Location: 1237676-1238027 bp Feature: domain Description: PHA0251 7 Location: 1 237676-1 238027 bp Feature: gene Location: 1238110-1238496 bp Feature: domain Description: PHA02517 Location: 1238125-1238494 bp Feature: domain Description: PHA0251 7 Location: 1 2381 25-1 238494 bp Feature: gene Location: 1238644-1239888 bp Ori: CCD08408.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1238848-1239505 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 238848-1 239505 bp Feature: domain Description: GIIM Note: maturase Location: 1239586-1239802 bp Feature: domain Description: GIIM Note: maturase Location: 1 239586-1 239802 bp Feature: gene Location: 1240419-1240712 bp Ori: CCD08409.1 Feature: domain Description: InsE Location: 1240431-1240692 bp Feature: domain Description: InsE Location: 1 240431 -1 240692 bp Feature: gene Location: 1240783-1241355 bp Ori: CCD08410.1 Feature: domain Description: PHA02517 Location: 1240795-1241329 bp Feature: domain Description: PHA0251 7 Location: 1 240795-1 241 329 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MATE_MurJ_like (cd13123), InsE (COG2963), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), Methyltransf_31 (pfam13847), YhhI (COG5433), Phage_int_SAM_2 (pfam12834), RVT-Retrons, Trypsin_2 (pfam13365)
conj_TOL_TraD (TIGR03754)