myRT

myRT report for GCA_000310105.2_ASM31010v2

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Seq: CP013139.1 Pseudoalteromonas sp. Bsw20308 strain BSW20308 plasmid pPBSW1, complete sequence (906103 bp)
Overview 1 RT 1: 854690-860184 bp Neighborhood of RT #1 [854690, 860184] CurA RimL RVT-Retrons Trypsin_2 anmK Feature: gene Location: 854690-855718 bp Ori: ALQ10526.1 Feature: domain Description: CurA Location: 854699-855707 bp Feature: domain Description: CurA Location: 854699-855707 bp Feature: gene Location: 855898-856404 bp Ori: ALQ10527.1 Feature: domain Description: RimL Location: 855904-856402 bp Feature: domain Description: RimL Location: 855904-856402 bp Feature: gene Location: 856468-858135 bp Ori: ALQ10528.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 856630-857236 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 856630-857236 bp Feature: domain Description: Trypsin_2 Location: 857620-858040 bp Feature: domain Description: Trypsin_2 Location: 857620-858040 bp Feature: gene Location: 858460-859665 bp Ori: ALQ10529.1 Feature: domain Description: anmK Location: 858511-859651 bp Feature: domain Description: anmK Location: 85851 1 -859651 bp Feature: gene Location: 859699-860184 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CurA (COG2130), RimL (COG1670), RVT-Retrons, Trypsin_2 (pfam13365), anmK (PRK09585)

Seq: CP013138.1 Pseudoalteromonas sp. Bsw20308, complete genome (3924123 bp)
Overview 1 RT 1: 713055-718954 bp 2 RT 2: 2842436-2847080 bp Neighborhood of RT #1 [713055, 718965] RVT-UG15 PRK12513 Neighborhood of RT #2 [2842436, 2847133] RVT-GII InsE PHA02517 RVT-GII Tra5 HTH_Tnp_1 Feature: gene Location: 713055-713876 bp Feature: gene Location: 714441-715511 bp Feature: gene Location: 716075-717718 bp Ori: ALQ07128.1 Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 716495-716900 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 716495-716900 bp Feature: gene Location: 717774-718385 bp Feature: gene Location: 718372-718965 bp Ori: ALQ07130.1 Feature: domain Description: PRK12513 Location: 718420-718954 bp Feature: domain Description: PRK12 513 Location: 71842 0-718954 bp Feature: gene Location: 2842436-2842660 bp Feature: gene Location: 2842738-2843088 bp Feature: gene Location: 2843841-2844350 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2844033-2844351 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 844033-2 844351 bp Feature: gene Location: 2844429-2844740 bp Ori: ALQ09797.1 Feature: domain Description: InsE Location: 2844432-2844726 bp Feature: domain Description: InsE Location: 2 844432 -2 84472 6 bp Feature: gene Location: 2844773-2845609 bp Ori: ALQ08793.1 Feature: domain Description: PHA02517 Location: 2844797-2845586 bp Feature: domain Description: PHA02 517 Location: 2 844797-2 845586 bp Feature: gene Location: 2845611-2846003 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2845623-2845926 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 84562 3-2 84592 6 bp Feature: gene Location: 2846019-2846846 bp Ori: ALQ09798.1 Feature: domain Description: Tra5 Location: 2846226-2846808 bp Feature: domain Description: Tra5 Location: 2 8462 2 6-2 846808 bp Feature: gene Location: 2846867-2847133 bp Ori: ALQ08794.1 Feature: domain Description: HTH_Tnp_1 Location: 2846873-2847080 bp Feature: domain Description: HTH_Tnp_1 Location: 2 846873-2 847080 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG15, PRK12513 (RNA polymerase sigma factor; Provisional), RVT-GII, InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), Tra5 (COG2801), HTH_Tnp_1 (pfam01527)