myRT

myRT report for GCA_000313175.2_ASM31317v2

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Seq: CP006694.1 Leptospira santarosai serovar Shermani str. LT 821 chromosome I, complete sequence (3659905 bp)
Overview 1 RT 1: 1891623-1898775 bp 2 RT 2: 2061551-2071460 bp Neighborhood of RT #1 [1891623, 1898775] S1-P1_nuclease RVT-GII GIIM DUF1563 Enterotoxin_a VCBS Neighborhood of RT #2 [2061551, 2071519] KdtA DDE_Tnp_1_6 RVT-GII GIIM PHA02517 InsE RVT-GII GIIM SBBP SBBP SBBP SBBP SBBP SBBP Feature: gene Location: 1891623-1891805 bp Feature: gene Location: 1892397-1893275 bp Ori: EKT86388.1 Feature: domain Description: S1-P1_nuclease Location: 1892475-1893261 bp Feature: domain Description: S1 -P1 _nuclease Location: 1 892475-1 893261 bp Feature: gene Location: 1893694-1894998 bp Ori: AIT10926.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1894003-1894627 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 894003-1 894627 bp Feature: domain Description: GIIM Note: maturase Location: 1894699-1894903 bp Feature: domain Description: GIIM Note: maturase Location: 1 894699-1 894903 bp Feature: gene Location: 1895683-1897752 bp Ori: EKT86256.1 Feature: domain Description: DUF1563 Location: 1895695-1895740 bp Feature: domain Description: DUF1 563 Location: 1 895695-1 895740 bp Feature: domain Description: Enterotoxin_a Location: 1895821-1896523 bp Feature: domain Description: Enterotoxin_a Location: 1 895821 -1 896523 bp Feature: domain Description: VCBS Location: 1896592-1896700 bp Feature: domain Description: VCBS Location: 1 896592-1 896700 bp Feature: gene Location: 1898668-1898775 bp Feature: gene Location: 2061551-2062810 bp Ori: EKT85977.1 Feature: domain Description: KdtA Location: 2061560-2062805 bp Feature: domain Description: KdtA Location: 2061 560-2062805 bp Feature: gene Location: 2062903-2063109 bp Ori: AIT10942.1 Feature: domain Description: DDE_Tnp_1_6 Location: 2062909-2063047 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 2062909-2063047 bp Feature: gene Location: 2064203-2065537 bp Ori: AIT10943.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2064536-2065184 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2064536-20651 84 bp Feature: domain Description: GIIM Note: maturase Location: 2065265-2065457 bp Feature: domain Description: GIIM Note: maturase Location: 2065265-2065457 bp Feature: gene Location: 2066215-2066868 bp Ori: AIT10944.1 Feature: domain Description: PHA02517 Location: 2066245-2066854 bp Feature: domain Description: PHA0251 7 Location: 2066245-2066854 bp Feature: gene Location: 2067057-2067428 bp Ori: AIT10945.1 Feature: domain Description: InsE Location: 2067063-2067324 bp Feature: domain Description: InsE Location: 2067063-2067324 bp Feature: gene Location: 2067802-2068674 bp Feature: gene Location: 2068657-2069658 bp Ori: AIT10947.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2068663-2069287 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2068663-2069287 bp Feature: domain Description: GIIM Note: maturase Location: 2069359-2069563 bp Feature: domain Description: GIIM Note: maturase Location: 2069359-2069563 bp Feature: gene Location: 2069740-2070066 bp Feature: gene Location: 2070101-2071519 bp Ori: EKT86888.1 Feature: domain Description: SBBP Location: 2070260-2070365 bp Feature: domain Description: SBBP Location: 2070260-2070365 bp Feature: domain Description: SBBP Location: 2070434-2070533 bp Feature: domain Description: SBBP Location: 2070434-2070533 bp Feature: domain Description: SBBP Location: 2070620-2070719 bp Feature: domain Description: SBBP Location: 2070620-207071 9 bp Feature: domain Description: SBBP Location: 2070968-2071064 bp Feature: domain Description: SBBP Location: 2070968-2071 064 bp Feature: domain Description: SBBP Location: 2071142-2071268 bp Feature: domain Description: SBBP Location: 2071 1 42-2071 268 bp Feature: domain Description: SBBP Location: 2071355-2071460 bp Feature: domain Description: SBBP Location: 2071 355-2071 460 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT S1-P1_nuclease (pfam02265), RVT-GII, GIIM (pfam08388), DUF1563 (pfam07599), Enterotoxin_a (pfam01375), VCBS (pfam13517), KdtA (COG1519), DDE_Tnp_1_6 (pfam13751), PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963)
SBBP (pfam06739)