myRT

myRT report for GCA_000313385.1_ASM31338v1

Download annotations/find similar RTs

Seq: CP003932.1 Francisella tularensis subsp. holarctica F92, complete genome (1886888 bp)
Overview 1 RT 1: 631615-635214 bp 2 RT 2: 1222616-1227675 bp Neighborhood of RT #1 [631615, 635237] RVT-UG4 DsbB SufE Neighborhood of RT #2 [1222616, 1227710] rlmL KOG0539 RVT-Retrons DDE_3 COG3415 Feature: gene Location: 631615-631812 bp Feature: gene Location: 631863-632276 bp Feature: gene Location: 633039-633266 bp Ori: AFX70353.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 633105-633210 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 6331 05-63321 0 bp Feature: gene Location: 633578-634114 bp Ori: AFX70354.1 Feature: domain Description: DsbB Location: 633611-634061 bp Feature: domain Description: DsbB Location: 63361 1 -634061 bp Feature: gene Location: 634821-635237 bp Ori: AFX70355.1 Feature: domain Description: SufE Location: 634860-635214 bp Feature: domain Description: SufE Location: 634860-63521 4 bp Feature: gene Location: 1222616-1224769 bp Ori: AFX70931.1 Gene: rlmL Feature: domain Description: rlmL Location: 1222628-1224764 bp Feature: domain Description: rlmL Location: 1 222628-1 224764 bp Feature: gene Location: 1224844-1225398 bp Ori: AFX70932.1 Feature: domain Description: KOG0539 Location: 1224916-1225393 bp Feature: domain Description: KOG0539 Location: 1 22491 6-1 225393 bp Feature: gene Location: 1226364-1226858 bp Ori: AFX70933.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1226382-1226694 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 226382-1 226694 bp Feature: gene Location: 1226830-1227342 bp Ori: AFX70934.1 Feature: domain Description: DDE_3 Location: 1226875-1227292 bp Feature: domain Description: DDE_3 Location: 1 226875-1 227292 bp Feature: gene Location: 1227330-1227710 bp Ori: AFX70935.1 Feature: domain Description: COG3415 Location: 1227342-1227675 bp Feature: domain Description: COG341 5 Location: 1 227342-1 227675 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, DsbB (pfam02600), SufE (pfam02657), rlmL (PRK11783), KOG0539 (KOG0539, Sphingolipid fatty acid hydroxylase ), RVT-Retrons, DDE_3 (pfam13358), COG3415 (Transposase )