myRT

myRT report for GCA_000317105.1_ASM31710v1

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Seq: CP003607.1 Oscillatoria acuminata PCC 6304, complete genome (7689443 bp)
Overview 1 RT 1: 579952-589687 bp 2 RT 2: 2948041-2952730 bp 3 RT 3: 3140031-3150991 bp 4 RT 4: 3787378-3791139 bp 5 RT 5: 3901925-3909444 bp 6 RT 6: 4033062-4038497 bp 7 RT 7: 4046756-4058393 bp 8 RT 8: 4401020-4412560 bp 9 RT 9: 4982079-4995074 bp 10 RT 10: 5036218-5047031 bp 11 RT 11: 5569527-5578042 bp 12 RT 12: 5684210-5690991 bp 13 RT 13: 6128652-6136657 bp 14 RT 14: 6978656-6988692 bp 15 RT 15: 7442681-7453004 bp Neighborhood of RT #1 [579952, 589689] HTH_LUXR NB-ARC STKc_PknB_like RVT_N RVT-GII GIIM HNH HEAT_2 HEAT_PBS HEAT_2 HEAT_2 SLH OprB Neighborhood of RT #2 [2948041, 2952730] PyrE RVT_N RVT-GII GIIM HNHc Neighborhood of RT #3 [3140031, 3151032] Peptidase_C14 WD40 WD40 WD40 WD40 WD40 WD40 KOG0550 TPR RVT_N RVT-GII GIIM HNH MidA Neighborhood of RT #4 [3787378, 3791186] NadA terB_like RVT_N RVT-GII GIIM HNH Neighborhood of RT #5 [3901925, 3909458] glut_syn PRK10638 RVT_N RVT-GII GIIM HNH HflX Neighborhood of RT #6 [4033062, 4038514] KOG4254 RVT_N RVT-GII GIIM HNH SnoaL_2 Neighborhood of RT #7 [4046756, 4058398] COG4748 COG3378 RVT_N RVT-GII GIIM HNH RVT_N RVT-GII GIIM HNH LapA_dom PRK05920 Neighborhood of RT #8 [4401020, 4412565] MHYT MHYT MHYT PAS PAS sensory_box COG4251 PAS GAF TMAO_torS pleD PRK10060 RVT_N RVT-GII GIIM HNH AhpC-TSA KOG0852 Neighborhood of RT #9 [4982079, 4995100] Haemagg_act COG4995 RVT_N RVT-GII GIIM HNH PGM_like2 LapA_dom Neighborhood of RT #10 [5036218, 5047840] dCache_1 HAMP KOG4171 RVT_N RVT-GII GIIM CHASE CHASE1 KOG4171 PRK14559 PRK14559 PRK14559 Neighborhood of RT #11 [5569527, 5578188] SUL1 PRK00347 RVT_N RVT-GII GIIM HNH gid_trmFO S2P-M50_like_2 Neighborhood of RT #12 [5684210, 5691032] PRK05437 RVT_N RVT-GII GIIM HNH SppA_67K COG2345 Neighborhood of RT #13 [6128652, 6136657] PRK14333 DUF4365 RVT_N RVT-GII GIIM HNH APH Neighborhood of RT #14 [6978656, 6988739] TetR_N TetR_C_15 COQ4 RVT_N RVT-GII GIIM HNH mutL KOG1978 PPC PPC PPC PPC PPC Peptidases_S8_Subtilisin_like Neighborhood of RT #15 [7442681, 7453255] RND_mfp RND_mfp RND_mfp AcrB RVT_N RVT-GII GIIM HNHc anmK Uma2 Feature: gene Location: 579952-581727 bp Ori: AFY80238.1 Feature: domain Description: HTH_LUXR Location: 580078-580210 bp Feature: domain Description: HTH_LUXR Location: 580078-58021 0 bp Feature: domain Description: NB-ARC Location: 580474-580771 bp Feature: domain Description: NB-ARC Location: 580474-580771 bp Feature: gene Location: 581891-582781 bp Ori: AFY80239.1 Feature: domain Description: STKc_PknB_like Location: 582080-582755 bp Feature: domain Description: STKc_PknB_like Location: 582080-582755 bp Feature: gene Location: 583706-585451 bp Ori: AFY80240.1 Feature: domain Description: RVT_N Location: 583748-583994 bp Feature: domain Description: RVT_N Location: 583748-583994 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 584036-584708 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 584036-584708 bp Feature: domain Description: GIIM Note: maturase Location: 584813-585041 bp Feature: domain Description: GIIM Note: maturase Location: 58481 3-585041 bp Feature: domain Description: HNH Note: nucleases Location: 585284-585419 bp Feature: domain Description: HNH Note: nucleases Location: 585284-58541 9 bp Feature: gene Location: 586175-587623 bp Ori: AFY80241.1 Feature: domain Description: HEAT_2 Location: 586499-586727 bp Feature: domain Description: HEAT_2 Location: 586499-586727 bp Feature: domain Description: HEAT_PBS Location: 586730-586802 bp Feature: domain Description: HEAT_PBS Location: 586730-586802 bp Feature: domain Description: HEAT_2 Location: 587018-587237 bp Feature: domain Description: HEAT_2 Location: 58701 8-587237 bp Feature: domain Description: HEAT_2 Location: 587393-587603 bp Feature: domain Description: HEAT_2 Location: 587393-587603 bp Feature: gene Location: 587962-589689 bp Ori: AFY80242.1 Feature: domain Description: SLH Location: 588271-588397 bp Feature: domain Description: SLH Location: 588271 -588397 bp Feature: domain Description: OprB Location: 588466-589687 bp Feature: domain Description: OprB Location: 588466-589687 bp Feature: gene Location: 2948041-2948661 bp Ori: AFY82018.1 Feature: domain Description: PyrE Location: 2948113-2948650 bp Feature: domain Description: PyrE Location: 29481 1 3-2948650 bp Feature: gene Location: 2948756-2949160 bp Feature: gene Location: 2949346-2951139 bp Ori: AFY82020.1 Feature: domain Description: RVT_N Location: 2949370-2949616 bp Feature: domain Description: RVT_N Location: 2949370-294961 6 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2949658-2950348 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2949658-2950348 bp Feature: domain Description: GIIM Note: maturase Location: 2950447-2950657 bp Feature: domain Description: GIIM Note: maturase Location: 2950447-2950657 bp Feature: domain Description: HNHc Note: nucleases Location: 2950876-2951020 bp Feature: domain Description: HNHc Note: nucleases Location: 2950876-2951 020 bp Feature: gene Location: 2951454-2951888 bp Feature: gene Location: 2952047-2952730 bp Feature: gene Location: 3140031-3144962 bp Ori: AFY82166.1 Feature: domain Description: Peptidase_C14 Location: 3140046-3140565 bp Feature: domain Description: Peptidase_C1 4 Location: 31 40046-31 40565 bp Feature: domain Description: WD40 Location: 3142377-3142752 bp Feature: domain Description: WD40 Location: 31 42377-31 42752 bp Feature: domain Description: WD40 Location: 3142755-3142872 bp Feature: domain Description: WD40 Location: 31 42755-31 42872 bp Feature: domain Description: WD40 Location: 3142881-3142971 bp Feature: domain Description: WD40 Location: 31 42881 -31 42971 bp Feature: domain Description: WD40 Location: 3143019-3143136 bp Feature: domain Description: WD40 Location: 31 4301 9-31 431 36 bp Feature: domain Description: WD40 Location: 3143145-3143259 bp Feature: domain Description: WD40 Location: 31 431 45-31 43259 bp Feature: domain Description: WD40 Location: 3143286-3144138 bp Feature: domain Description: WD40 Location: 31 43286-31 441 38 bp Feature: domain Description: KOG0550 Location: 3144240-3144519 bp Feature: domain Description: KOG0550 Location: 31 44240-31 4451 9 bp Feature: domain Description: TPR Location: 3144564-3144849 bp Feature: domain Description: TPR Location: 31 44564-31 44849 bp Feature: gene Location: 3145020-3145484 bp Feature: gene Location: 3146251-3148008 bp Ori: AFY82168.1 Feature: domain Description: RVT_N Location: 3146305-3146551 bp Feature: domain Description: RVT_N Location: 31 46305-31 46551 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3146593-3147265 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 46593-31 47265 bp Feature: domain Description: GIIM Note: maturase Location: 3147370-3147598 bp Feature: domain Description: GIIM Note: maturase Location: 31 47370-31 47598 bp Feature: domain Description: HNH Note: nucleases Location: 3147841-3147976 bp Feature: domain Description: HNH Note: nucleases Location: 31 47841 -31 47976 bp Feature: gene Location: 3148334-3149830 bp Feature: gene Location: 3149833-3151032 bp Ori: AFY82170.1 Feature: domain Description: MidA Location: 3149857-3150991 bp Feature: domain Description: MidA Location: 31 49857-31 50991 bp Feature: gene Location: 3787378-3788352 bp Ori: AFY82662.1 Feature: domain Description: NadA Location: 3787423-3788347 bp Feature: domain Description: NadA Location: 3787423-3788347 bp Feature: gene Location: 3788569-3789054 bp Ori: AFY82663.1 Feature: domain Description: terB_like Location: 3788623-3788875 bp Feature: domain Description: terB_like Location: 3788623-3788875 bp Feature: gene Location: 3789405-3791186 bp Ori: AFY82664.1 Feature: domain Description: RVT_N Location: 3789471-3789714 bp Feature: domain Description: RVT_N Location: 3789471 -378971 4 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3789759-3790428 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3789759-3790428 bp Feature: domain Description: GIIM Note: maturase Location: 3790533-3790743 bp Feature: domain Description: GIIM Note: maturase Location: 3790533-3790743 bp Feature: domain Description: HNH Note: nucleases Location: 3791004-3791139 bp Feature: domain Description: HNH Note: nucleases Location: 3791 004-3791 1 39 bp Feature: gene Location: 3901925-3902902 bp Ori: AFY82752.1 Feature: domain Description: glut_syn Location: 3901931-3902885 bp Feature: domain Description: glut_syn Location: 3901 931 -3902885 bp Feature: gene Location: 3903157-3903426 bp Ori: AFY82753.1 Feature: domain Description: PRK10638 Location: 3903169-3903412 bp Feature: domain Description: PRK1 0638 Location: 39031 69-390341 2 bp Feature: gene Location: 3903767-3905524 bp Ori: AFY82754.1 Feature: domain Description: RVT_N Location: 3903821-3904067 bp Feature: domain Description: RVT_N Location: 3903821 -3904067 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3904109-3904781 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39041 09-3904781 bp Feature: domain Description: GIIM Note: maturase Location: 3904886-3905114 bp Feature: domain Description: GIIM Note: maturase Location: 3904886-39051 1 4 bp Feature: domain Description: HNH Note: nucleases Location: 3905357-3905492 bp Feature: domain Description: HNH Note: nucleases Location: 3905357-3905492 bp Feature: gene Location: 3906454-3907272 bp Feature: gene Location: 3907743-3909458 bp Ori: AFY82756.1 Feature: domain Description: HflX Location: 3908358-3909444 bp Feature: domain Description: HflX Location: 3908358-3909444 bp Feature: gene Location: 4033062-4034648 bp Ori: AFY82822.1 Feature: domain Description: KOG4254 Location: 4033110-4034643 bp Feature: domain Description: KOG4254 Location: 40331 1 0-4034643 bp Feature: gene Location: 4034645-4034716 bp Feature: gene Location: 4034924-4036669 bp Ori: AFY82824.1 Feature: domain Description: RVT_N Location: 4034966-4035212 bp Feature: domain Description: RVT_N Location: 4034966-403521 2 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4035254-4035926 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4035254-4035926 bp Feature: domain Description: GIIM Note: maturase Location: 4036031-4036259 bp Feature: domain Description: GIIM Note: maturase Location: 4036031 -4036259 bp Feature: domain Description: HNH Note: nucleases Location: 4036502-4036637 bp Feature: domain Description: HNH Note: nucleases Location: 4036502-4036637 bp Feature: gene Location: 4037764-4037982 bp Feature: gene Location: 4038131-4038514 bp Ori: AFY82826.1 Feature: domain Description: SnoaL_2 Location: 4038164-4038497 bp Feature: domain Description: SnoaL_2 Location: 40381 64-4038497 bp Feature: gene Location: 4046756-4047946 bp Ori: AFY82830.1 Feature: domain Description: COG4748 Location: 4046759-4047770 bp Feature: domain Description: COG4748 Location: 4046759-4047770 bp Feature: gene Location: 4048352-4050820 bp Ori: AFY82831.1 Feature: domain Description: COG3378 Location: 4049333-4050620 bp Feature: domain Description: COG3378 Location: 4049333-4050620 bp Feature: gene Location: 4052247-4054004 bp Ori: AFY82832.1 Feature: domain Description: RVT_N Location: 4052301-4052547 bp Feature: domain Description: RVT_N Location: 4052301 -4052547 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4052589-4053261 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4052589-4053261 bp Feature: domain Description: GIIM Note: maturase Location: 4053366-4053594 bp Feature: domain Description: GIIM Note: maturase Location: 4053366-4053594 bp Feature: domain Description: HNH Note: nucleases Location: 4053837-4053972 bp Feature: domain Description: HNH Note: nucleases Location: 4053837-4053972 bp Feature: gene Location: 4054848-4056593 bp Ori: AFY82833.1 Feature: domain Description: RVT_N Location: 4054890-4055136 bp Feature: domain Description: RVT_N Location: 4054890-40551 36 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4055178-4055850 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40551 78-4055850 bp Feature: domain Description: GIIM Note: maturase Location: 4055955-4056183 bp Feature: domain Description: GIIM Note: maturase Location: 4055955-40561 83 bp Feature: domain Description: HNH Note: nucleases Location: 4056426-4056561 bp Feature: domain Description: HNH Note: nucleases Location: 4056426-4056561 bp Feature: gene Location: 4056858-4057643 bp Ori: AFY82834.1 Feature: domain Description: LapA_dom Location: 4056945-4057068 bp Feature: domain Description: LapA_dom Location: 4056945-4057068 bp Feature: gene Location: 4057751-4058398 bp Ori: AFY82835.1 Feature: domain Description: PRK05920 Location: 4057790-4058393 bp Feature: domain Description: PRK05920 Location: 4057790-4058393 bp Feature: gene Location: 4401020-4406506 bp Ori: AFY83076.1 Feature: domain Description: MHYT Location: 4401185-4401356 bp Feature: domain Description: MHYT Location: 4401 1 85-4401 356 bp Feature: domain Description: MHYT Location: 4401374-4401530 bp Feature: domain Description: MHYT Location: 4401 374-4401 530 bp Feature: domain Description: MHYT Location: 4401578-4401650 bp Feature: domain Description: MHYT Location: 4401 578-4401 650 bp Feature: domain Description: PAS Location: 4401728-4402181 bp Feature: domain Description: PAS Location: 4401 728-44021 81 bp Feature: domain Description: PAS Location: 4402610-4403078 bp Feature: domain Description: PAS Location: 440261 0-4403078 bp Feature: domain Description: sensory_box Location: 4403096-4403462 bp Feature: domain Description: sensory_box Location: 4403096-4403462 bp Feature: domain Description: COG4251 Location: 4403474-4403654 bp Feature: domain Description: COG4251 Location: 4403474-4403654 bp Feature: domain Description: PAS Location: 4403792-4404404 bp Feature: domain Description: PAS Location: 4403792-4404404 bp Feature: domain Description: GAF Location: 4404479-4404977 bp Feature: domain Description: GAF Location: 4404479-4404977 bp Feature: domain Description: TMAO_torS Location: 4404998-4406246 bp Feature: domain Description: TMAO_torS Location: 4404998-4406246 bp Feature: gene Location: 4406503-4408338 bp Ori: AFY83077.1 Feature: domain Description: pleD Location: 4406539-4406953 bp Feature: domain Description: pleD Location: 4406539-4406953 bp Feature: domain Description: PRK10060 Location: 4406998-4408321 bp Feature: domain Description: PRK1 0060 Location: 4406998-4408321 bp Feature: gene Location: 4408778-4410523 bp Ori: AFY83078.1 Feature: domain Description: RVT_N Location: 4408820-4409066 bp Feature: domain Description: RVT_N Location: 4408820-4409066 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4409108-4409780 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44091 08-4409780 bp Feature: domain Description: GIIM Note: maturase Location: 4409885-4410113 bp Feature: domain Description: GIIM Note: maturase Location: 4409885-441 01 1 3 bp Feature: domain Description: HNH Note: nucleases Location: 4410356-4410491 bp Feature: domain Description: HNH Note: nucleases Location: 441 0356-441 0491 bp Feature: gene Location: 4411243-4411803 bp Ori: AFY83079.1 Feature: domain Description: AhpC-TSA Location: 4411348-4411714 bp Feature: domain Description: AhpC-TSA Location: 441 1 348-441 1 71 4 bp Feature: gene Location: 4411969-4412565 bp Ori: AFY83080.1 Feature: domain Description: KOG0852 Location: 4411990-4412560 bp Feature: domain Description: KOG0852 Location: 441 1 990-441 2560 bp Feature: gene Location: 4982079-4988336 bp Ori: AFY83475.1 Feature: domain Description: Haemagg_act Location: 4982178-4982508 bp Feature: domain Description: Haemagg_act Location: 49821 78-4982508 bp Feature: gene Location: 4988314-4990326 bp Ori: AFY83476.1 Feature: domain Description: COG4995 Location: 4989142-4990324 bp Feature: domain Description: COG4995 Location: 49891 42-4990324 bp Feature: gene Location: 4990635-4992392 bp Ori: AFY83477.1 Feature: domain Description: RVT_N Location: 4990689-4990935 bp Feature: domain Description: RVT_N Location: 4990689-4990935 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4990977-4991649 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4990977-4991 649 bp Feature: domain Description: GIIM Note: maturase Location: 4991754-4991982 bp Feature: domain Description: GIIM Note: maturase Location: 4991 754-4991 982 bp Feature: domain Description: HNH Note: nucleases Location: 4992225-4992360 bp Feature: domain Description: HNH Note: nucleases Location: 4992225-4992360 bp Feature: gene Location: 4993362-4994801 bp Ori: AFY83478.1 Feature: domain Description: PGM_like2 Location: 4993392-4994769 bp Feature: domain Description: PGM_like2 Location: 4993392-4994769 bp Feature: gene Location: 4994870-4995100 bp Ori: AFY83479.1 Feature: domain Description: LapA_dom Location: 4994954-4995074 bp Feature: domain Description: LapA_dom Location: 4994954-4995074 bp Feature: gene Location: 5036218-5038227 bp Ori: AFY83499.1 Feature: domain Description: dCache_1 Location: 5036371-5037250 bp Feature: domain Description: dCache_1 Location: 5036371 -5037250 bp Feature: domain Description: HAMP Location: 5037355-5037508 bp Feature: domain Description: HAMP Location: 5037355-5037508 bp Feature: domain Description: KOG4171 Location: 5037523-5038216 bp Feature: domain Description: KOG41 71 Location: 5037523-503821 6 bp Feature: gene Location: 5038335-5039390 bp Feature: gene Location: 5040090-5041703 bp Ori: AFY83501.1 Feature: domain Description: RVT_N Location: 5040132-5040378 bp Feature: domain Description: RVT_N Location: 50401 32-5040378 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5040420-5041092 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5040420-5041 092 bp Feature: domain Description: GIIM Note: maturase Location: 5041197-5041425 bp Feature: domain Description: GIIM Note: maturase Location: 5041 1 97-5041 425 bp Feature: gene Location: 5042499-5044433 bp Ori: AFY83502.1 Feature: domain Description: CHASE Location: 5042739-5043318 bp Feature: domain Description: CHASE Location: 5042739-504331 8 bp Feature: domain Description: CHASE1 Location: 5043483-5043612 bp Feature: domain Description: CHASE1 Location: 5043483-504361 2 bp Feature: domain Description: KOG4171 Location: 5043666-5044392 bp Feature: domain Description: KOG41 71 Location: 5043666-5044392 bp Feature: gene Location: 5045420-5047840 bp Ori: AFY83503.1 Feature: domain Description: PRK14559 Location: 5045444-5045528 bp Feature: domain Description: PRK1 4559 Location: 5045444-5045528 bp Feature: domain Description: PRK14559 Location: 5045867-5046194 bp Feature: domain Description: PRK1 4559 Location: 5045867-50461 94 bp Feature: domain Description: PRK14559 Location: 5046248-5047031 bp Feature: domain Description: PRK1 4559 Location: 5046248-5047031 bp Feature: gene Location: 5569527-5571182 bp Ori: AFY83866.1 Feature: domain Description: SUL1 Location: 5569560-5571162 bp Feature: domain Description: SUL1 Location: 5569560-5571 1 62 bp Feature: gene Location: 5571394-5572260 bp Ori: AFY83867.1 Feature: domain Description: PRK00347 Location: 5571550-5572249 bp Feature: domain Description: PRK00347 Location: 5571 550-5572249 bp Feature: gene Location: 5572639-5574384 bp Ori: AFY83868.1 Feature: domain Description: RVT_N Location: 5572681-5572927 bp Feature: domain Description: RVT_N Location: 5572681 -5572927 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5572969-5573641 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5572969-5573641 bp Feature: domain Description: GIIM Note: maturase Location: 5573746-5573974 bp Feature: domain Description: GIIM Note: maturase Location: 5573746-5573974 bp Feature: domain Description: HNH Note: nucleases Location: 5574217-5574352 bp Feature: domain Description: HNH Note: nucleases Location: 557421 7-5574352 bp Feature: gene Location: 5575239-5576591 bp Ori: AFY83869.1 Feature: domain Description: gid_trmFO Location: 5575260-5576556 bp Feature: domain Description: gid_trmFO Location: 5575260-5576556 bp Feature: gene Location: 5576698-5578188 bp Ori: AFY83870.1 Feature: domain Description: S2P-M50_like_2 Location: 5577343-5578042 bp Feature: domain Description: S2P-M50_like_2 Location: 5577343-5578042 bp Feature: gene Location: 5684210-5685280 bp Ori: AFY83946.1 Feature: domain Description: PRK05437 Location: 5684234-5685242 bp Feature: domain Description: PRK05437 Location: 5684234-5685242 bp Feature: gene Location: 5685286-5685417 bp Feature: gene Location: 5685520-5687277 bp Ori: AFY83948.1 Feature: domain Description: RVT_N Location: 5685574-5685820 bp Feature: domain Description: RVT_N Location: 5685574-5685820 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5685862-5686534 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5685862-5686534 bp Feature: domain Description: GIIM Note: maturase Location: 5686639-5686867 bp Feature: domain Description: GIIM Note: maturase Location: 5686639-5686867 bp Feature: domain Description: HNH Note: nucleases Location: 5687110-5687245 bp Feature: domain Description: HNH Note: nucleases Location: 56871 1 0-5687245 bp Feature: gene Location: 5688120-5689949 bp Ori: AFY83949.1 Feature: domain Description: SppA_67K Location: 5688195-5689917 bp Feature: domain Description: SppA_67K Location: 56881 95-568991 7 bp Feature: gene Location: 5690220-5691032 bp Ori: AFY83950.1 Feature: domain Description: COG2345 Location: 5690337-5690991 bp Feature: domain Description: COG2345 Location: 5690337-5690991 bp Feature: gene Location: 6128652-6130010 bp Ori: AFY84320.1 Feature: domain Description: PRK14333 Location: 6128664-6129987 bp Feature: domain Description: PRK1 4333 Location: 61 28664-61 29987 bp Feature: gene Location: 6130443-6131675 bp Ori: AFY84321.1 Feature: domain Description: DUF4365 Location: 6130476-6130866 bp Feature: domain Description: DUF4365 Location: 61 30476-61 30866 bp Feature: gene Location: 6132733-6134478 bp Ori: AFY84322.1 Feature: domain Description: RVT_N Location: 6132775-6133021 bp Feature: domain Description: RVT_N Location: 61 32775-61 33021 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6133063-6133735 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61 33063-61 33735 bp Feature: domain Description: GIIM Note: maturase Location: 6133840-6134068 bp Feature: domain Description: GIIM Note: maturase Location: 61 33840-61 34068 bp Feature: domain Description: HNH Note: nucleases Location: 6134311-6134446 bp Feature: domain Description: HNH Note: nucleases Location: 61 3431 1 -61 34446 bp Feature: gene Location: 6135310-6136428 bp Ori: AFY84323.1 Feature: domain Description: APH Location: 6135964-6136258 bp Feature: domain Description: APH Location: 61 35964-61 36258 bp Feature: gene Location: 6136469-6136657 bp Feature: gene Location: 6978656-6979330 bp Ori: AFY84966.1 Feature: domain Description: TetR_N Location: 6978737-6978875 bp Feature: domain Description: TetR_N Location: 6978737-6978875 bp Feature: domain Description: TetR_C_15 Location: 6978947-6979271 bp Feature: domain Description: TetR_C_1 5 Location: 6978947-6979271 bp Feature: gene Location: 6979536-6980282 bp Ori: AFY84967.1 Feature: domain Description: COQ4 Location: 6979641-6980253 bp Feature: domain Description: COQ4 Location: 6979641 -6980253 bp Feature: gene Location: 6980724-6982469 bp Ori: AFY84968.1 Feature: domain Description: RVT_N Location: 6980766-6981012 bp Feature: domain Description: RVT_N Location: 6980766-6981 01 2 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6981054-6981726 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6981 054-6981 726 bp Feature: domain Description: GIIM Note: maturase Location: 6981831-6982059 bp Feature: domain Description: GIIM Note: maturase Location: 6981 831 -6982059 bp Feature: domain Description: HNH Note: nucleases Location: 6982302-6982437 bp Feature: domain Description: HNH Note: nucleases Location: 6982302-6982437 bp Feature: gene Location: 6983235-6984905 bp Ori: AFY84969.1 Feature: domain Description: mutL Location: 6983256-6984348 bp Feature: domain Description: mutL Location: 6983256-6984348 bp Feature: domain Description: KOG1978 Location: 6984708-6984828 bp Feature: domain Description: KOG1 978 Location: 6984708-6984828 bp Feature: gene Location: 6985287-6988739 bp Ori: AFY84970.1 Feature: domain Description: PPC Location: 6985887-6986103 bp Feature: domain Description: PPC Location: 6985887-69861 03 bp Feature: domain Description: PPC Location: 6986268-6986562 bp Feature: domain Description: PPC Location: 6986268-6986562 bp Feature: domain Description: PPC Location: 6986730-6986940 bp Feature: domain Description: PPC Location: 6986730-6986940 bp Feature: domain Description: PPC Location: 6987102-6987315 bp Feature: domain Description: PPC Location: 69871 02-698731 5 bp Feature: domain Description: PPC Location: 6987474-6987687 bp Feature: domain Description: PPC Location: 6987474-6987687 bp Feature: domain Description: Peptidases_S8_Subtilisin_like Location: 6987900-6988692 bp Feature: domain Description: Peptidases_S8_Subtilisin_like Location: 6987900-6988692 bp Feature: gene Location: 7442681-7444492 bp Ori: AFY85274.1 Feature: domain Description: RND_mfp Location: 7442966-7443332 bp Feature: domain Description: RND_mfp Location: 7442966-7443332 bp Feature: domain Description: RND_mfp Location: 7443401-7443617 bp Feature: domain Description: RND_mfp Location: 7443401 -744361 7 bp Feature: domain Description: RND_mfp Location: 7443665-7444454 bp Feature: domain Description: RND_mfp Location: 7443665-7444454 bp Feature: gene Location: 7444999-7448220 bp Ori: AFY85275.1 Feature: domain Description: AcrB Location: 7445014-7448110 bp Feature: domain Description: AcrB Location: 744501 4-74481 1 0 bp Feature: gene Location: 7449046-7450809 bp Ori: AFY85276.1 Feature: domain Description: RVT_N Location: 7449088-7449334 bp Feature: domain Description: RVT_N Location: 7449088-7449334 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7449376-7450048 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7449376-7450048 bp Feature: domain Description: GIIM Note: maturase Location: 7450153-7450381 bp Feature: domain Description: GIIM Note: maturase Location: 74501 53-7450381 bp Feature: domain Description: HNHc Note: nucleases Location: 7450597-7450744 bp Feature: domain Description: HNHc Note: nucleases Location: 7450597-7450744 bp Feature: gene Location: 7451066-7452235 bp Ori: AFY85277.1 Feature: domain Description: anmK Location: 7451072-7452221 bp Feature: domain Description: anmK Location: 7451 072-7452221 bp Feature: gene Location: 7452491-7453255 bp Ori: AFY85278.1 Feature: domain Description: Uma2 Location: 7452512-7453004 bp Feature: domain Description: Uma2 Location: 745251 2-7453004 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_LUXR (smart00421), NB-ARC (pfam00931), STKc_PknB_like (cd14014), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), HEAT_2 (pfam13646), HEAT_PBS (pfam03130), SLH (pfam00395)
OprB (pfam04966), PyrE (COG0461), HNHc (smart00507), Peptidase_C14 (pfam00656), WD40 (smart00320), KOG0550 (KOG0550, Molecular chaperone (DnaJ superfamily) ), TPR (smart00028), MidA (COG1565), NadA (pfam02445), terB_like (cl11965)
glut_syn (TIGR01380), PRK10638 (glutaredoxin 3; Provisional), HflX (COG2262), KOG4254 (KOG4254, Phytoene desaturase ), SnoaL_2 (pfam12680), COG4748 (Uncharacterized protein, contains restriction enzyme R protein N terminal (HSDR_N) domain ), COG3378 (Phage- or plasmid-associated DNA primase ), LapA_dom (pfam06305), PRK05920 (aromatic acid decarboxylase; Validated), MHYT (pfam03707)
PAS (smart00091), sensory_box (TIGR00229), COG4251 (Bacteriophytochrome (light-regulated signal transduction histidine kinase) ), GAF (smart00065), TMAO_torS (TIGR02956), pleD (PRK09581), PRK10060 (cyclic di-GMP phosphodiesterase), AhpC-TSA (pfam00578), KOG0852 (KOG0852, Alkyl hydroperoxide reductase, thiol specific antioxidant and related enzymes ), Haemagg_act (smart00912)
COG4995 (Uncharacterized conserved protein, contains CHAT domain ), PGM_like2 (cd05800), dCache_1 (pfam02743), HAMP (smart00304), KOG4171 (KOG4171, Adenylate/guanylate kinase ), CHASE (smart01079), CHASE1 (COG3614), PRK14559 (serine/threonine phosphatase), SUL1 (COG0659), PRK00347 (DNA/RNA nuclease SfsA)
gid_trmFO (TIGR00137), S2P-M50_like_2 (cd06160), PRK05437 (isopentenyl pyrophosphate isomerase; Provisional), SppA_67K (TIGR00705), COG2345 (Predicted transcriptional regulator, ArsR family ), PRK14333 ((dimethylallyl)adenosine tRNA methylthiotransferase; Provisional), DUF4365 (pfam14280), APH (pfam01636), TetR_N (pfam00440), TetR_C_15 (pfam17918)
COQ4 (COG5031), mutL (PRK00095), KOG1978 (KOG1978, DNA mismatch repair protein - MLH2/PMS1/Pms2 family ), PPC (pfam04151), Peptidases_S8_Subtilisin_like (cd07473), RND_mfp (TIGR01730), AcrB (COG0841), anmK (PRK09585), Uma2 (pfam05685)