myRT

myRT report for GCA_000317575.1_ASM31757v1

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Seq: CP003653.1 Stanieria cyanosphaera PCC 7437, complete genome (5041209 bp)
Overview 1 RT 1: 48141-57089 bp Neighborhood of RT #1 [48141, 57106] PhoH thyX YkfC RVT-GII GIIM HNHc YkfC YkfC RVT-GII GIIM McrA CheY Feature: gene Location: 48141-49097 bp Ori: AFZ33670.1 Feature: domain Description: PhoH Location: 48153-49092 bp Feature: domain Description: PhoH Location: 481 53-49092 bp Feature: gene Location: 49555-49791 bp Ori: AFZ33671.1 Feature: domain Description: thyX Location: 49588-49753 bp Feature: domain Description: thyX Location: 49588-49753 bp Feature: gene Location: 50453-52219 bp Ori: AFZ33672.1 Feature: domain Description: YkfC Location: 50492-50648 bp Feature: domain Description: YkfC Location: 50492-50648 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50819-51506 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5081 9-51 506 bp Feature: domain Description: GIIM Note: maturase Location: 51605-51839 bp Feature: domain Description: GIIM Note: maturase Location: 51 605-51 839 bp Feature: domain Description: HNHc Note: nucleases Location: 52034-52196 bp Feature: domain Description: HNHc Note: nucleases Location: 52034-521 96 bp Feature: gene Location: 53905-55752 bp Ori: AFZ33673.1 Feature: domain Description: YkfC Location: 53944-54100 bp Feature: domain Description: YkfC Location: 53944-541 00 bp Feature: domain Description: YkfC Location: 54157-54283 bp Feature: domain Description: YkfC Location: 541 57-54283 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54346-55030 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54346-55030 bp Feature: domain Description: GIIM Note: maturase Location: 55129-55363 bp Feature: domain Description: GIIM Note: maturase Location: 551 29-55363 bp Feature: domain Description: McrA Location: 55438-55714 bp Feature: domain Description: McrA Location: 55438-5571 4 bp Feature: gene Location: 56199-56405 bp Feature: gene Location: 56732-57106 bp Ori: AFZ33675.1 Feature: domain Description: CheY Location: 56738-57089 bp Feature: domain Description: CheY Location: 56738-57089 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PhoH (pfam02562), thyX (TIGR02170), YkfC (COG3344), RVT-GII, GIIM (pfam08388), HNHc (smart00507), McrA (COG4058), CheY (COG0784)