myRT

myRT report for GCA_000317675.1_ASM31767v1

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Seq: CP003947.1 Cyanobacterium aponinum PCC 10605, complete genome (4114099 bp)
Overview 1 RT 1: 1582181-1588305 bp 2 RT 2: 3303702-3312398 bp Neighborhood of RT #1 [1582181, 1588310] MJ1255 GlcD RVT_N RVT-GII GIIM HNHc DUF1810 Mo-nitro_C Neighborhood of RT #2 [3303702, 3312478] GUN4 RVT_N RVT-GII GOGAT_sm_gam YebA DUF4129 Feature: gene Location: 1582181-1583263 bp Ori: AFZ53432.1 Feature: domain Description: MJ1255 Location: 1582208-1583138 bp Feature: domain Description: MJ1 255 Location: 1 582208-1 5831 38 bp Feature: gene Location: 1583293-1584612 bp Ori: AFZ53433.1 Feature: domain Description: GlcD Location: 1583410-1583995 bp Feature: domain Description: GlcD Location: 1 58341 0-1 583995 bp Feature: gene Location: 1585334-1587001 bp Ori: AFZ53434.1 Feature: domain Description: RVT_N Location: 1585385-1585628 bp Feature: domain Description: RVT_N Location: 1 585385-1 585628 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1585670-1586309 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 585670-1 586309 bp Feature: domain Description: GIIM Note: maturase Location: 1586366-1586594 bp Feature: domain Description: GIIM Note: maturase Location: 1 586366-1 586594 bp Feature: domain Description: HNHc Note: nucleases Location: 1586837-1586978 bp Feature: domain Description: HNHc Note: nucleases Location: 1 586837-1 586978 bp Feature: gene Location: 1587422-1587874 bp Ori: AFZ53435.1 Feature: domain Description: DUF1810 Location: 1587455-1587857 bp Feature: domain Description: DUF1 81 0 Location: 1 587455-1 587857 bp Feature: gene Location: 1588023-1588310 bp Ori: AFZ53436.1 Feature: domain Description: Mo-nitro_C Location: 1588068-1588305 bp Feature: domain Description: Mo-nitro_C Location: 1 588068-1 588305 bp Feature: gene Location: 3303702-3304292 bp Ori: AFZ54842.1 Feature: domain Description: GUN4 Location: 3303825-3304233 bp Feature: domain Description: GUN4 Location: 3303825-3304233 bp Feature: gene Location: 3304362-3304508 bp Feature: gene Location: 3306090-3307163 bp Ori: AFZ54844.1 Feature: domain Description: RVT_N Location: 3306141-3306384 bp Feature: domain Description: RVT_N Location: 33061 41 -3306384 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3306426-3307059 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3306426-3307059 bp Feature: gene Location: 3308331-3309812 bp Ori: AFZ54845.1 Feature: domain Description: GOGAT_sm_gam Location: 3308340-3309810 bp Feature: domain Description: GOGAT_sm_gam Location: 3308340-330981 0 bp Feature: gene Location: 3310151-3312478 bp Ori: AFZ54846.1 Feature: domain Description: YebA Location: 3311078-3312011 bp Feature: domain Description: YebA Location: 331 1 078-331 201 1 bp Feature: domain Description: DUF4129 Location: 3312236-3312398 bp Feature: domain Description: DUF41 29 Location: 331 2236-331 2398 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MJ1255 (TIGR00661), GlcD (COG0277), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DUF1810 (pfam08837), Mo-nitro_C (pfam06967), GUN4 (pfam05419), GOGAT_sm_gam (TIGR01317)
YebA (COG1305), DUF4129 (pfam13559)