myRT

myRT report for GCA_000317695.1_ASM31769v1

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Seq: CP003660.1 Anabaena cylindrica PCC 7122 plasmid pANACY.01, complete sequence (219925 bp)
Overview 1 RT 1: 144444-151578 bp 2 RT 2: 169269-214651 bp Neighborhood of RT #1 [144444, 151610] TPR_12 TPR_12 TPR_12 TPR_10 TPR_12 TPR_12 TPR_10 TPR_12 CHAT HTH_XRE DUF4384 RVT-CRISPR cas1 Neighborhood of RT #2 [169269, 214698] ZnMc_pappalysin_like CARDB CARDB CARDB CARDB CARDB CARDB PA14 CARDB CARDB CARDB CARDB CARDB CARDB CARDB CARDB CARDB CARDB CARDB CARDB CARDB CARDB CARDB CARDB CARDB CARDB CARDB CARDB CARDB CARDB CARDB CARDB YvrE tand_rpt_95 tand_rpt_95 tand_rpt_95 He_PIG Big_9 tand_rpt_95 tand_rpt_95 tand_rpt_95 RHS_repeat Dockerin_II tand_rpt_95 NUC1 tand_rpt_95 PKD PKD PKD PKD PKD Calx-beta RVT_N RVT-GII McrA couple_hipB xerC Feature: gene Location: 144444-148217 bp Ori: AFZ61059.1 Feature: domain Description: TPR_12 Location: 144597-144810 bp Feature: domain Description: TPR_1 2 Location: 1 44597-1 4481 0 bp Feature: domain Description: TPR_12 Location: 144840-145065 bp Feature: domain Description: TPR_1 2 Location: 1 44840-1 45065 bp Feature: domain Description: TPR_12 Location: 145092-145311 bp Feature: domain Description: TPR_1 2 Location: 1 45092-1 4531 1 bp Feature: domain Description: TPR_10 Location: 145350-145470 bp Feature: domain Description: TPR_1 0 Location: 1 45350-1 45470 bp Feature: domain Description: TPR_12 Location: 145470-145695 bp Feature: domain Description: TPR_1 2 Location: 1 45470-1 45695 bp Feature: domain Description: TPR_12 Location: 145725-145917 bp Feature: domain Description: TPR_1 2 Location: 1 45725-1 4591 7 bp Feature: domain Description: TPR_10 Location: 145977-146094 bp Feature: domain Description: TPR_1 0 Location: 1 45977-1 46094 bp Feature: domain Description: TPR_12 Location: 146100-146292 bp Feature: domain Description: TPR_1 2 Location: 1 461 00-1 46292 bp Feature: domain Description: CHAT Location: 147075-148194 bp Feature: domain Description: CHAT Location: 1 47075-1 481 94 bp Feature: gene Location: 148499-149266 bp Ori: AFZ61060.1 Feature: domain Description: HTH_XRE Location: 148544-148703 bp Feature: domain Description: HTH_XRE Location: 1 48544-1 48703 bp Feature: domain Description: DUF4384 Location: 148895-149126 bp Feature: domain Description: DUF4384 Location: 1 48895-1 491 26 bp Feature: gene Location: 149604-151610 bp Ori: AFZ61061.1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 149793-150399 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1 49793-1 50399 bp Feature: domain Description: cas1 Location: 150615-151578 bp Feature: domain Description: cas1 Location: 1 5061 5-1 51 578 bp Feature: gene Location: 169269-202784 bp Ori: AFZ61077.1 Feature: domain Description: ZnMc_pappalysin_like Location: 169836-170049 bp Feature: domain Description: ZnMc_pappalysin_like Location: 1 69836-1 70049 bp Feature: domain Description: CARDB Location: 170514-170853 bp Feature: domain Description: CARDB Location: 1 7051 4-1 70853 bp Feature: domain Description: CARDB Location: 170877-171213 bp Feature: domain Description: CARDB Location: 1 70877-1 71 21 3 bp Feature: domain Description: CARDB Location: 171240-171576 bp Feature: domain Description: CARDB Location: 1 71 240-1 71 576 bp Feature: domain Description: CARDB Location: 171603-171951 bp Feature: domain Description: CARDB Location: 1 71 603-1 71 951 bp Feature: domain Description: CARDB Location: 171993-172323 bp Feature: domain Description: CARDB Location: 1 71 993-1 72323 bp Feature: domain Description: CARDB Location: 172347-172692 bp Feature: domain Description: CARDB Location: 1 72347-1 72692 bp Feature: domain Description: PA14 Location: 172878-173265 bp Feature: domain Description: PA1 4 Location: 1 72878-1 73265 bp Feature: domain Description: CARDB Location: 173313-173643 bp Feature: domain Description: CARDB Location: 1 7331 3-1 73643 bp Feature: domain Description: CARDB Location: 173667-174003 bp Feature: domain Description: CARDB Location: 1 73667-1 74003 bp Feature: domain Description: CARDB Location: 174030-174363 bp Feature: domain Description: CARDB Location: 1 74030-1 74363 bp Feature: domain Description: CARDB Location: 174390-174732 bp Feature: domain Description: CARDB Location: 1 74390-1 74732 bp Feature: domain Description: CARDB Location: 174756-175104 bp Feature: domain Description: CARDB Location: 1 74756-1 751 04 bp Feature: domain Description: CARDB Location: 175137-175473 bp Feature: domain Description: CARDB Location: 1 751 37-1 75473 bp Feature: domain Description: CARDB Location: 175497-175836 bp Feature: domain Description: CARDB Location: 1 75497-1 75836 bp Feature: domain Description: CARDB Location: 175869-176205 bp Feature: domain Description: CARDB Location: 1 75869-1 76205 bp Feature: domain Description: CARDB Location: 176229-176571 bp Feature: domain Description: CARDB Location: 1 76229-1 76571 bp Feature: domain Description: CARDB Location: 176598-176934 bp Feature: domain Description: CARDB Location: 1 76598-1 76934 bp Feature: domain Description: CARDB Location: 176961-177297 bp Feature: domain Description: CARDB Location: 1 76961 -1 77297 bp Feature: domain Description: CARDB Location: 177321-177657 bp Feature: domain Description: CARDB Location: 1 77321 -1 77657 bp Feature: domain Description: CARDB Location: 177681-178017 bp Feature: domain Description: CARDB Location: 1 77681 -1 7801 7 bp Feature: domain Description: CARDB Location: 178044-178374 bp Feature: domain Description: CARDB Location: 1 78044-1 78374 bp Feature: domain Description: CARDB Location: 178407-178749 bp Feature: domain Description: CARDB Location: 1 78407-1 78749 bp Feature: domain Description: CARDB Location: 178788-179067 bp Feature: domain Description: CARDB Location: 1 78788-1 79067 bp Feature: domain Description: CARDB Location: 179151-179484 bp Feature: domain Description: CARDB Location: 1 791 51 -1 79484 bp Feature: domain Description: CARDB Location: 179523-179865 bp Feature: domain Description: CARDB Location: 1 79523-1 79865 bp Feature: domain Description: CARDB Location: 179898-180234 bp Feature: domain Description: CARDB Location: 1 79898-1 80234 bp Feature: domain Description: CARDB Location: 180327-180660 bp Feature: domain Description: CARDB Location: 1 80327-1 80660 bp Feature: domain Description: CARDB Location: 180699-180999 bp Feature: domain Description: CARDB Location: 1 80699-1 80999 bp Feature: domain Description: CARDB Location: 181149-181443 bp Feature: domain Description: CARDB Location: 1 81 1 49-1 81 443 bp Feature: domain Description: CARDB Location: 181578-181935 bp Feature: domain Description: CARDB Location: 1 81 578-1 81 935 bp Feature: domain Description: CARDB Location: 181977-182310 bp Feature: domain Description: CARDB Location: 1 81 977-1 8231 0 bp Feature: domain Description: YvrE Location: 185265-185523 bp Feature: domain Description: YvrE Location: 1 85265-1 85523 bp Feature: domain Description: tand_rpt_95 Location: 186408-186627 bp Feature: domain Description: tand_rpt_95 Location: 1 86408-1 86627 bp Feature: domain Description: tand_rpt_95 Location: 186798-187026 bp Feature: domain Description: tand_rpt_95 Location: 1 86798-1 87026 bp Feature: domain Description: tand_rpt_95 Location: 187065-187320 bp Feature: domain Description: tand_rpt_95 Location: 1 87065-1 87320 bp Feature: domain Description: He_PIG Location: 187467-187587 bp Feature: domain Description: He_PIG Location: 1 87467-1 87587 bp Feature: domain Description: Big_9 Location: 187626-187899 bp Feature: domain Description: Big_9 Location: 1 87626-1 87899 bp Feature: domain Description: tand_rpt_95 Location: 188334-188562 bp Feature: domain Description: tand_rpt_95 Location: 1 88334-1 88562 bp Feature: domain Description: tand_rpt_95 Location: 188589-188841 bp Feature: domain Description: tand_rpt_95 Location: 1 88589-1 88841 bp Feature: domain Description: tand_rpt_95 Location: 188898-189090 bp Feature: domain Description: tand_rpt_95 Location: 1 88898-1 89090 bp Feature: domain Description: RHS_repeat Location: 190263-190356 bp Feature: domain Description: RHS_repeat Location: 1 90263-1 90356 bp Feature: domain Description: Dockerin_II Location: 190788-190938 bp Feature: domain Description: Dockerin_II Location: 1 90788-1 90938 bp Feature: domain Description: tand_rpt_95 Location: 191019-191223 bp Feature: domain Description: tand_rpt_95 Location: 1 91 01 9-1 91 223 bp Feature: domain Description: NUC1 Location: 197409-198213 bp Feature: domain Description: NUC1 Location: 1 97409-1 9821 3 bp Feature: domain Description: tand_rpt_95 Location: 199992-200223 bp Feature: domain Description: tand_rpt_95 Location: 1 99992-200223 bp Feature: domain Description: PKD Location: 200238-200463 bp Feature: domain Description: PKD Location: 200238-200463 bp Feature: domain Description: PKD Location: 200529-200721 bp Feature: domain Description: PKD Location: 200529-200721 bp Feature: domain Description: PKD Location: 200778-200976 bp Feature: domain Description: PKD Location: 200778-200976 bp Feature: domain Description: PKD Location: 201030-201219 bp Feature: domain Description: PKD Location: 201 030-201 21 9 bp Feature: domain Description: PKD Location: 201291-201495 bp Feature: domain Description: PKD Location: 201 291 -201 495 bp Feature: domain Description: Calx-beta Location: 201528-201771 bp Feature: domain Description: Calx-beta Location: 201 528-201 771 bp Feature: gene Location: 203095-205665 bp Feature: gene Location: 207389-208960 bp Ori: AFZ61079.1 Feature: domain Description: RVT_N Location: 207425-207671 bp Feature: domain Description: RVT_N Location: 207425-207671 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 207722-208376 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 207722-208376 bp Feature: domain Description: McrA Location: 208607-208931 bp Feature: domain Description: McrA Location: 208607-208931 bp Feature: gene Location: 210480-212078 bp Ori: AFZ61080.1 Feature: domain Description: couple_hipB Location: 211914-212022 bp Feature: domain Description: couple_hipB Location: 21 1 91 4-21 2022 bp Feature: gene Location: 213769-214698 bp Ori: AFZ61081.1 Feature: domain Description: xerC Location: 213871-214651 bp Feature: domain Description: xerC Location: 21 3871 -21 4651 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TPR_12 (pfam13424), TPR_10 (pfam13374), CHAT (pfam12770), HTH_XRE (smart00530), DUF4384 (pfam14326), RVT-CRISPR, cas1 (TIGR00287), ZnMc_pappalysin_like (cd04275), CARDB (pfam07705), PA14 (smart00758)
YvrE (COG3386), tand_rpt_95 (NF012211), He_PIG (pfam05345), Big_9 (pfam17963), RHS_repeat (pfam05593), Dockerin_II (cd14254), NUC1 (COG1864), PKD (smart00089), Calx-beta (pfam03160), RVT_N (pfam13655)
RVT-GII, McrA (COG4058), couple_hipB (TIGR03070), xerC (PRK01287)

Seq: CP003659.1 Anabaena cylindrica PCC 7122, complete genome (6395836 bp)
Overview 1 RT 1: 3128077-3134664 bp Neighborhood of RT #1 [3128077, 3134664] FtsE RVT_N RVT-GII GIIM HNHc Feature: gene Location: 3128077-3128823 bp Ori: AFZ58179.1 Feature: domain Description: FtsE Location: 3128170-3128818 bp Feature: domain Description: FtsE Location: 312 8170-312 8818 bp Feature: gene Location: 3128987-3129664 bp Feature: gene Location: 3130345-3132030 bp Ori: AFZ58181.1 Feature: domain Description: RVT_N Location: 3130399-3130645 bp Feature: domain Description: RVT_N Location: 3130399-3130645 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3130693-3131344 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3130693-3131344 bp Feature: domain Description: GIIM Note: maturase Location: 3131395-3131629 bp Feature: domain Description: GIIM Note: maturase Location: 3131395-313162 9 bp Feature: domain Description: HNHc Note: nucleases Location: 3131854-3132013 bp Feature: domain Description: HNHc Note: nucleases Location: 3131854-3132 013 bp Feature: gene Location: 3133151-3133768 bp Feature: gene Location: 3133909-3134664 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FtsE (TIGR02673), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)