myRT

myRT report for GCA_000328665.1_ASM32866v1

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Seq: CP003362.1 Methanomethylovorans hollandica DSM 15978, complete genome (2428904 bp)
Overview 1 RT 1: 1148128-1152006 bp Neighborhood of RT #1 [1148128, 1152536] Cas4_I-A_I-B_I-C_I-D_II-B RVT-CRISPR GIIM Cmr1_III-B Feature: gene Location: 1148128-1148739 bp Ori: AGB49375.1 Feature: domain Description: Cas4_I-A_I-B_I-C_I-D_II-B Location: 1148176-1148737 bp Feature: domain Description: Cas4_I-A_I-B_I-C_I-D_II-B Location: 1 1 481 76-1 1 48737 bp Feature: gene Location: 1148923-1149180 bp Feature: gene Location: 1149913-1151103 bp Ori: AGB49377.1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1150183-1150816 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1 1 501 83-1 1 5081 6 bp Feature: domain Description: GIIM Note: maturase Location: 1150900-1151083 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 50900-1 1 51 083 bp Feature: gene Location: 1151201-1151485 bp Feature: gene Location: 1151568-1152536 bp Ori: AGB49379.1 Feature: domain Description: Cmr1_III-B Location: 1151595-1152006 bp Feature: domain Description: Cmr1 _III-B Location: 1 1 51 595-1 1 52006 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas4_I-A_I-B_I-C_I-D_II-B (cl00641), RVT-CRISPR, GIIM (pfam08388), Cmr1_III-B (cd09657)

Seq: CP003363.1 Methanomethylovorans hollandica DSM 15978 plasmid pMETHO01, complete sequence (285109 bp)
Overview 1 RT 1: 171356-183839 bp Neighborhood of RT #1 [171356, 183847] HEAT_2 HEAT_2 HEAT_2 RVT_N RVT-GII GIIM NHL_like_4 NHL_like_4 PKD PKD Hydrolase_4 PKD Disaggr_repeat PKD PKD Disaggr_repeat PKD Disaggr_repeat Feature: gene Location: 171356-173737 bp Ori: AGB50751.1 Feature: domain Description: HEAT_2 Location: 171827-172004 bp Feature: domain Description: HEAT_2 Location: 17182 7-172 004 bp Feature: domain Description: HEAT_2 Location: 172055-172217 bp Feature: domain Description: HEAT_2 Location: 172 055-172 2 17 bp Feature: domain Description: HEAT_2 Location: 172274-172451 bp Feature: domain Description: HEAT_2 Location: 172 2 74-172 451 bp Feature: gene Location: 173924-174532 bp Feature: gene Location: 175865-177343 bp Ori: AGB50753.1 Feature: domain Description: RVT_N Location: 175934-176177 bp Feature: domain Description: RVT_N Location: 175934-176177 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 176222-176882 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1762 2 2 -176882 bp Feature: domain Description: GIIM Note: maturase Location: 176939-177167 bp Feature: domain Description: GIIM Note: maturase Location: 176939-177167 bp Feature: gene Location: 177830-178024 bp Feature: gene Location: 178202-183847 bp Ori: AGB50755.1 Feature: domain Description: NHL_like_4 Location: 178301-178538 bp Feature: domain Description: NHL_like_4 Location: 178301-178538 bp Feature: domain Description: NHL_like_4 Location: 178607-179201 bp Feature: domain Description: NHL_like_4 Location: 178607-1792 01 bp Feature: domain Description: PKD Location: 179210-179432 bp Feature: domain Description: PKD Location: 1792 10-179432 bp Feature: domain Description: PKD Location: 179459-179678 bp Feature: domain Description: PKD Location: 179459-179678 bp Feature: domain Description: Hydrolase_4 Location: 179690-180194 bp Feature: domain Description: Hydrolase_4 Location: 179690-180194 bp Feature: domain Description: PKD Location: 181013-181235 bp Feature: domain Description: PKD Location: 181013-1812 35 bp Feature: domain Description: Disaggr_repeat Location: 181286-181820 bp Feature: domain Description: Disaggr_repeat Location: 1812 86-18182 0 bp Feature: domain Description: PKD Location: 181868-182108 bp Feature: domain Description: PKD Location: 181868-182 108 bp Feature: domain Description: PKD Location: 182144-182384 bp Feature: domain Description: PKD Location: 182 144-182 384 bp Feature: domain Description: Disaggr_repeat Location: 182432-182966 bp Feature: domain Description: Disaggr_repeat Location: 182 432 -182 966 bp Feature: domain Description: PKD Location: 183008-183254 bp Feature: domain Description: PKD Location: 183008-1832 54 bp Feature: domain Description: Disaggr_repeat Location: 183305-183839 bp Feature: domain Description: Disaggr_repeat Location: 183305-183839 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HEAT_2 (pfam13646), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), NHL_like_4 (cd14955), PKD (smart00089), Hydrolase_4 (pfam12146), Disaggr_repeat (pfam06848)