myRT

myRT report for GCA_000338115.2_ASM33811v2

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Seq: CP004082.1 Lactobacillus plantarum ZJ316, complete genome (3203964 bp)
Overview 1 RT 1: 1192038-1195700 bp Neighborhood of RT #1 [1192038, 1195700] RVT-GII RVT-GII GIIM fumC Feature: gene Location: 1192038-1192175 bp Feature: gene Location: 1192303-1192455 bp Feature: gene Location: 1192517-1192690 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1192625-1192688 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 92625-1 1 92688 bp Feature: gene Location: 1192694-1193689 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1192700-1193243 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 92700-1 1 93243 bp Feature: domain Description: GIIM Note: maturase Location: 1193297-1193516 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 93297-1 1 9351 6 bp Feature: gene Location: 1194164-1195546 bp Feature: domain Description: fumC Location: 1194167-1195535 bp Feature: domain Description: fumC Location: 1 1 941 67-1 1 95535 bp Feature: gene Location: 1195560-1195700 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), fumC (PRK00485)

Seq: CP006247.1 Lactobacillus plantarum ZJ316 plasmid pLP-ZJ101, complete sequence (15167 bp)
Overview 1 RT 1: 2-2281 bp Neighborhood of RT #1 [2, 2544] RVT-UG8 DUF536 Rep_3 Feature: gene Location: 2-1105 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 563-974 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 563-974 bp Feature: gene Location: 1140-1616 bp Feature: domain Description: DUF536 Location: 1401-1524 bp Feature: domain Description: DUF536 Location: 1401-152 4 bp Feature: gene Location: 1609-2544 bp Feature: domain Description: Rep_3 Location: 1615-2281 bp Feature: domain Description: Rep_3 Location: 1615-2 2 81 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG8, DUF536 (pfam04394), Rep_3 (pfam01051)